Ll_transcript_485097

• Id Trinity: TRINITY_DN49315_c0_g1_i18
• Name Transcript: Ll_transcript_485097
• Sequence: CTCTTCTTCATTTGACACTAACATCAAAGTGTGTGTGATGTTAGACATCAACCTTTTCAGAGAAGAAAAGGGTCACGACCCTGAAATCATTCGCAATTCC CAACGCACTCGTTTTTCTACTGTCCAAGTAGTCGATGATGTTATCAATCTCGACAAACAATGGCGAACACGTACTATCCCCTCTTTCCGACTAGTGCGAT TAAGACTTGATTGTTGTCCTTGTAACTTTTGTCGTATTTATTTCAGGTCAATTTGAGCTTGAGAATCTTAAAAGAGACTTCAACAAGATCAATAAGGAAA TCTCCAAACTCAAGCGTGTCAGCATTTCTATCTCATCATTGTACTTGGTGGTGAAGATGCATCTAAGTTCATTGGTGAATCAGAAGAGACTAAGAAACTT ATAGCACAGAAAGAGGTTGAAGTTAGGGAAACATTCACACTTTTGAATTCCAAATTGGAAACTATTGGAAACCTTGTCCACCATTCTGTTCCAATCAGTG ATGATGAGGCTAACAATAAAGTGGTGAAATCATGGGGGGAGAAAAGAGTGGAACCTAAACTAAAGAATCACGTGGATCTAGTTGAGCTCCTAGGGATTGC AGATACAAAGAAAGGAGCTGATGTAGCTGGAGGTAGAGGTTTCTATCTCAAAGGAGATGGTGTTCGTCTTAACCAGGCTCTAATCAACTTTGGACTTGAT TTTCTGGAGAAAAGGGGATATACTTTACTGCATACTCCTTTCTTCATGAGAAAAGATATAATGTCAAAGTGTGCTCAATTAGCTCAATTCGATGAAGAGC TTTATAAGGTAACTGGTGAAGGGGATGACAAATATCTGATTGCAACAGCAGAGCAGCCCCTTTGTGCATATCATATAGATGATTGGATCCACCCTACCCG GCTACCTATAAGATATGCTGGGTATTCGTCATGCTTTCGTAAAGAAGCTGGATCTCACGGTCGAGATACTCTAGGAATATTCCGTGTTCACCAATTTGAG AAAGTGGAGCAGTTTTGCCTTACCAGCCCAAATGACAATGACTCATGGGACATGCATGAGGAAATGCTAAAGAACTCTGAGGAATTTTACCAAGCAGTAT GGTGCTTTCCCTCATTCAGCAATTTGAATATCATTTATACCATTCTCTATATTTGTTCAAATTTCAAATGAATATATAGTTTGTAAACGGCTACTGAATC CTTTAGTAACTTTAAAAAAATTATGGAAACAACAACGCTTGTGATGATTGTCAAATATGTATAACGAGGGGATTGTTTGATGCATCCTTATGTTTCTTTC TAAATCTGCAATATCTAGAAGTGTGGTGTATGCTTGTGATGATTGTCAGTACACTGTATTGGTTATAACTAAGCTCATAGCTTCGCATTATCTCATTTTT CTTTTTGTTGATGGTATCATTGCATAGAATCATAGATTGATGCATTGGTTGTCTCCAACCTAAATTAACTGTTTTCTTTTCCTCCCTTTCGATTTCCTTT CTAATGGAATTAAATTAACTTTTATGTCTTGTAGTTAAATATTCCATATCAAGTTGTTTCCAATGCATCTGGTGCTTTGAATGATGCTGCAGCAAAGAAG TATGATCTAGAAGCATGGTTTCCATCTTCTCAAGCTTACAGAGAGCTAGTGTCTTGCTCAAACTGCACAGACTATCAGGCCAGAAGATTAGAAATTCGAT ATGGGCAGAAGAAGAGCAATGATCAGACAAAGCAATATGTTCACTTATTGAATTCTACTCTAACGGCTACAGAGAGGACCATTTGCTGCATACTAGAGAA CAACCAGAAGGAGGACGGCGTAAAAATACCAGAAGTCCTCATACCATTCATGGGTGGAAAGACTTTCCTACCTTTCAAGAACCAACCAGTTAAAGAAGCC AAAGGGAAGAAATCAAAGACCTGAATGCCTTTTTTTAGTCTGAATTATTGTTATTAAGAGCCGGACCAGGATTATCACCTGTGCTATCTTCCACTGTAGC CTGTTTCTACCCCCTCCCTTCACTTTTTTTTATAGTCAAATGATAATGTCAAGTGTTCTACATATTTGTTGGTAATGGAAACACGTGGTAATTCAAACAC TGTATCTTCAATGACTATATTGTTAAGGTCTTGCAAAAGGTTCCTATTATTTCCATGTTTTCTGCAACTCATTAATGTATAGCATGCTCTGAATTTCTTT GGTACCCTGTTGGATATGGCACTCAAGGATAAGTTGTCAAACATCTATTGAATGCTATAGCCAATAAAGTATTTGACAATTTACAGTATATATCACTTTT GGAATGAAAAGATAGATAGCATACCCTGTATTGTAATATGGGCATAAATTGTTTCACAAATTCTGTTAAATATGTGAGTTGGCAGAGTTCAAGTTGTAGG AGTTGTGGGTTGTTGGGTTTAGAATTCTGAAGTTTGTATTGCTTTCCTTCTTGCAGGGCATTGAAACATGTTCAACTTAATCAAGCTCATGGTATACTAA ATTCAATTACCAAATTCATTGGAAAGAAGAATGCAGCTTGGAACTTTGGAACTAGAATATTTAGCCATGTTTTGTAGTAGAGAGTATGCGAGGTCTTACT TTGCAGCCCACCTTGATTATTACAAATATTCATGATTATGATTATTCTTTATAGCGATTATTTTAAACTAGCTTCAATTTTTTAAAATAATGCCTGTATG TGCTTTATACAATACATAGCCTGGGTAAAAGGCGAATATTGTGTTGACAGCCGACAATTAATTTAAAATTTTGTCAAATCTCTGATATGGATCAAC
• Tissue: pods
• Gene name: LI_gene_168323;
• Additional information: details;

Expression of Ll_transcript_485097

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485097

• Blastp: Serine--tRNA ligase from Helianthus with 79.86% of identity
• Blastx: Serine--tRNA ligase from Helianthus with 65.51% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452252.1)
• Pfam: tRNA synthetase class II core domain (G, H, P, S and T) (PF00587.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;