Ll_transcript_484588

• Id Trinity: TRINITY_DN49320_c4_g5_i2
• Name Transcript: Ll_transcript_484588
• Sequence: CATCAAGTGGAGAAGCGGTGGCAGTAGGTGGTGGTGGTGGTGGTGGAGGAGCGGTGGTAGGTGGTGGTGGTGGAGGAGGAGGAGGTTCAACTTCAGGGGA TGAAGAGAGAAGAATGGAAGAAGGGGAACGTGGTAGCTTCGGTGGGAACCGGTGGCCAAGACAAGAGACTTTGGCGTTGTTAAGGATACGGTCGGATATG GACGTGGCGTTTCGTGATGCAAGTGTTAAAAGTCCCTTGTGGGAACAGGTTTCCAGGAAGCTAGCAGAGCTTGGGTATCACAGAAACGCTAAGAAATGCA AAGAGAAATTTGAGAATGTATACAAGTATCACAAGAGAACCAAAGAAGGTCGAAGTGGCAAATCTGAAGGCAAAACATATCGATTTTTTGATCAATTAGA AGCTCTTGATCATCTTCATCAACCTCCAACAACTCCATCCCCTAACCCACCACAACCACCACTTGCACCACCACCATTATCATCAATAGTACCAACAACT ACAGTGGCAGTGCCAATGTCACAAGTGGTTAACAACACCACTCATAGTTGTGTCCCTCATGTTACTGTTCCATCAACAACTACTGGTGCTACAACAGTAC AATCTTTGACCATGAATCAAGGCATTGTTGTCACTACTACCCCATCAATTAGCCTTCCAAATATACCTTCTTATCCACCTACAAACCCTACAATCTTCCC CACACCACCCCCATTACCACCACAAGCAACAACAATAAACCCTACAGCCAACAATGCCACCGTACCAATCTCTTTCCCCAACATCCCAAACGATCTCTTG TCCAACTCTTCCTCATCGACTTCTTCGGATGATGGAATGTTGGAGGATAGGCATAAGCGGAAGCGGAAGCGCAAATGGGAGGACTTCTTCCATAGACTAA TGAAGGGAGTAGTGAAGAAGCAAGAGGAACAACAAAGGACATTCTTGGAAGCTATAGAGAAACGCGAGCACGAGCTAATGGCGAGAGAAGAAGCATGGAG AGTGCAAGAGATGCAAAGGATCAATAGGGAGAGGGAAATTTTAGCTCAAGAAAGATCAGTAGCTGCTGTCAAAGATGCTGCCGTTATGGCATTCTTGCAA AAGATAGCTGAACAACAAAATGGTGGACAAGCCTTGAACACCATCAACATTCCAACGCAACCACAGCCACAACCGGTGGCACAACCAATTGCACCGCAAA CACTAGTGCCAGATATTGTTCCAACACTGGTGCAACCGCAAGTACAATCACAACAACCACAGCTGCAATTAGTTGTTCAGCCCGGCCCACCAATACAACC TGTAGTGGTGCCACCGGTCCCACCGCAACAACATCAACTAGTGACGACTATGGAACCAGTGAGAGCTGATAATAATGGGGAGAACATGATGGGAGCAAGC TCATCAAGGTGGCCAAAAGTGGAGATTGAAGCATTGATAAAGCTGAGAACTGAGCTTGACGCGAAGTATCAAGAGAATGTACCAAAAGGGCCACTTTGGG AAGAGATCTCATCCTCAATGAGGAAACTGGGGTACAATAGGAATGCCAAGAGGTGCAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAGAAGGTGAA AGAAAGCAACAAGAATAGACCACAAGATTCCAAAACATGTCCATATTTTCACCAGCTTGATGCACTTTATAGAGAGAAGAAGAAGATGGTGCAGCCAGAG AGCATAGTGGCGCCGCTGATGGTGCAACCGGAGCAGCAATGGCCTCCTCAGCAGCATAGGGAAGAAGAAGAGGAAGGCGATGATGATGATTTTGATGAAG AAGAGAAAGATAATGGAGAGGAAGAAGAAGATGAAGAGAATGGAAGTGGTGGTAAGTATGAGGTAGTGGCAAATAAGGGTCCTTCAGCAGCATCAGTGGG TGGTGCTTCAGGTGAATAGTACTGTAGTGAAAGGTGCAAAAAAGTGCCCAAAAGAATGACACGTGTGAGTGTGTGTGTCAAAGAGATTATTGCAGGGGTT GTCGTAAAAGTGGAGAGTGGTGGTCGGAGGCTATTGGTGGTGGTTGTGGAAATGTGGAAATGTGGAAGAATTTGAAAATAGTGTACGACAGAATGACACA TGGGTACTGCGGTGGTGGGGATTCAGTGGGGTTTGGTACTTTTGTTGTTTCATATAGTCAGATAGATTATATGTTTTTCTAATTTATAAAATTTTATTAT TTTTTGGATAATTAATAAGGTACAGATCCAGGTTCCAATATATGAATAATAAAGAAAAAGGAGAGAAACACACCATGTTTTTAATTTTTGTTTTTAATAT TATGCTGGTGTAAATGAGAGAGGATATTGATTGGGGTTTTGTCTTTTATTTTTCAATTTCCTTCCTCTTGAAATGTTACATTCATTTTTAGTTTCCTTGT TTTAAAA
• Tissue: pods
• Gene name: LI_gene_168390;
• Additional information: details;

Expression of Ll_transcript_484588

FPKM

• PAB: 23.4
• PNAB: 13.3
• PS1: 10.5
• PS2: 6.5
• PS3: 9.7
• PW1: 19.7
• PW2: 23.9
• PW3: 19.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484588

• Blastp: Trihelix transcription factor GT-2 from Arabidopsis with 44.52% of identity
• Blastx: Trihelix transcription factor GT-2 from Arabidopsis with 66.17% of identity
• Eggnog: chromatin binding(ENOG410YBXG)
• Kegg: Link to kegg annotations (AT1G76890)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453353.1)
• Pfam: Myb/SANT-like DNA-binding domain (PF13837.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;