Ll_transcript_484763

• Id Trinity: TRINITY_DN49328_c0_g1_i1
• Name Transcript: Ll_transcript_484763
• Sequence: GATAAAGGTGACATTGGCAGAGATAAAGGTGACATTGGCAGAGATAAAAGTGACATTGGCAGAGATAAAGGTGACATTGGCAGAGATAAAGGTGACATTA GCAGAGATAAAGGTGTTTATGTTGGTGTTGAGGAGGAAGAAGATGACCAGGTTGATATAAAAGATGAAGAACTAGATGATATATGGAGGGAAATGTCAAT GGCAATAGAATGCTCCAAAGATGTTTCTGTGAACCCTCAGCCTGATGAAGAACCCGAAATTGATGAGGACTGTGATCATTCTTTTGTTTTAAAAGACGAC CTTGGTTACGTTTGTCGTGTTTGTGGGGTTATCGACAGAGGAATTGAAACCATATTTGAGTTCCAGTACAAGGTTAAAAGGAGTACTAGAACTTATGTGT CTGATTCATGGAATGCCAAAGAAAAAGATGCATTTGGAATCAAGATTGCTGAGGATGATCTCTTGGTAACTGACATCTCTGCACACCCTAGGCATATGAA ACAAATGAAGTCTCATCAAGTCGAAGGATTCAATTTTCTTGTTAGAAACCTTGCAGGTGATCATCCTGGGGGTTGTATCTTGGCACATGCTCCAGGATCT GGGAAGACATTCATGATAATCAGTTTCATGCAGAGTTTTCTTGGCAAGTATCCTAATGCTAGACCTCTAGTGGTGCTTCCTAAGGGGATACTATCAACTT GGAAGAAGGAGTTCCAGACATGGCAAGTGGAGGACATACCGCTCTATGACTTTTACACTGTGAAGGCAGACAGTAGATCTCAGCAACTTGAAGTGTTGAA ACAGTGGGTGGAACATAAGAGCATCCTTTTCTTAGGATATAAACAGTTCTCTTCAATCATATGTGAGAATGGAACTAGCAGCTCATCAACAGCTTGCCAA GAGATATTGCTTAAGGTTCCTTCAATTCTCATTTTAGATGAGGGACACAATCCAAGGAATGATAATACTGATATGGTACATTCCCTTGCCAAAGTACAAA CCCCTAGAAAAGTTGTACTGTCAGGAACCCTATATCAGAATCATGTGAAGGAGGTTTTTAACATCTTAAATCTTGTGAGGCCGAAGTTTATGAAGATGGA AACATCTAGGCTTATTGTCAAACGCATTTTCAGTAGAGTACATATACCTTCTGGTAAAAGAGGTTTCTTTGATTTGGTAGAAGACACATTGCAAAAGGAC CCAGATTTCAGAAGGAAAGTGGCTGTTATACAAGATTTGCGTGAGATGACTAGCCAGGTACTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCCG GTCTTGTTGAATTTACTGTCGTCCTCAATCTTACCCCTAGACAGAAGCTTGAAGCTGAAAAATTAAAGAAGTTATCCAGGAAGTTTAAGATTAGTTCTGT GGGTAGTGCTGTCTATCTTCATCCTAAATTGAAGCCCCTAGCTGAAAAATGTAGTGAAAATAGCAAAATTGATAATACAAAGGAACTGGATGATGTGCTA GAGAAACTGGACGTGAAAGATGGTGTGAAATCAAAATTCTTTCGCAATATGTTGAACCTATGTGAATCGGCTGGGGAGAGGCTGCTGGTTTTTAGCCAAT ATCTCTTACCTTTGAAATATTTAGAAAGGTTAACTATGAAATGGAAGGGTTGGAGTGTCGGGAAAGAAATCTTTGTCATCTCAGGAGAATCAAGCACTGA AGACAGAGAGTTGTCTATGGAAAAATTTAACAATTCGCCTGATGCCAAAATCTTCTTTGGCTCAATCAAAGCATGTGGAGAAGGCATATCATTGGTTGGG GCATCCCGCATCATTATTGTGGATGTTCATCTCAATCCATCAGTTACGCGCCAAGCTATCGGCCGTGCATTTCGACCTGGCCAGAAAAAGAAAGTTTTTG TATATCGGTTGATAGCTGCTGATTCTCCAGAAGAAGACGATCACAGTACTTGTTTTAAGAAGGAATTAATTTCAAAAATGTGGTTTGAATGGAATGAGTA TTGTGGTGATCGAGCTTTTGAAGTTGAGACAGTTCCTGTGAAGGAATGTGGTGATCTTTTTCTTGAAAGTCCGCTTTTAGCAGAAGATGTTAAAGCTTTG TATAAAAGGTAGAAGGTGGCATTATGTTCAATGGACTTGGGAATGCAAATGTCTTTTGCTGTTATATCAGTACTTTTGGCACTGGATTTTGGTTAAGAAC ATTGTAGGAGTTACTGAATTGAATTTGCTGTCTCTTATAGCTAGTTAATTGTGACTCATCCATCATGTCTTTAAAGATAAGCTGCTGCTGTATAGTGTTA AAATTTCTAACATGTTAATACTAAAAGCCAGCAATCTAGTTAATCATGTGTCTCTATGGCCTCAGCTGATTAGCTGTTTTTGTTTGAAATTTTACAAAAA CATATTTGAGATAACTTGAAACAGCCTCTTCACTCGAGACTTGCGTTCCCGGAAAGATAATATTTTATCCTTCCCGGAACTTATTAGGTGAGAATCTGGT GCATTAAACCGCTCTTTTTATAGGAGATTTTTGTGTTTTATGTATGTTTAGACAATCATGCA
• Tissue: pods
• Gene name: LI_gene_168439;
• Additional information: details;

Expression of Ll_transcript_484763

FPKM

• PAB: 0.9
• PNAB: 4.8
• PS1: 9.5
• PS2: 9.9
• PS3: 12.1
• PW1: 3.8
• PW2: 3.9
• PW3: 3.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484763

• Blastp: Protein CHROMATIN REMODELING 35 from Arabidopsis with 64% of identity
• Blastx: Protein CHROMATIN REMODELING 35 from Arabidopsis with 64.46% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT2G16390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453437.1)
• Pfam: Type III restriction enzyme, res subunit (PF04851.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;