| Id Trinity | TRINITY_DN49334_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_483649 |
| Sequence | CGAAGAGATAAAAGGGTGCGAGAGAGTGTTATCGCTGAGTTCTTTTTCGTTGCCTCCTCCACCTTCGCAATCATGATCATTTCCGAGAAGAACCGTAAGG AGATCTCCAAATACCTCTTTCAAGAGGGAGTTTTATATGCAAAGAAGGACTTCAATTTGGCGAAGCACCCGGAGATAGATGTGCCAAATCTGCAGGTGAT TAAGTTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACTAATGATGGCATTGAGTTCCTT AGGACTTACCTCAATCTCCCTTCAGAGATTGTCCCTGCCACGCTTAAGAAGCAGGCTAAGCCAGCTGGCAGACCCTTTGGTGGCCCACCCGGTGATCGCC CTAGAGGCCCACCACGCTTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGGTACCGTGGAGGTCCTCGAGGACCTGGCGGTGACTTTGGAGGTGA CAAGGGTGGAGCTCCTGCTGACTACAGACCTTCTTTTGGGGTAACTTTTCTGCACCTTATTTTCATGTTTTAATTTCTAGGCCATTATGTTTAATTTTGA GGTGGTAGAATTGTGTTCAAATAGCTCTACTATTTGATTGTGTGGTTTTTACAAATGCCTCTTATGTTAGTTACCATGGTTAGCTTTTCCCCTTATATTA GTTATCATTACATTGTGGCCCAGTCTTCATTCAAATTCTTCTGCACTTATCTGTTTATCATGTTTATAAAAGTTGCCTGTGCTTATTTCTTCTCTCATTT GATTTATGTTTTTGGTTACATTTAATATGTTTTCATGGGAAACTTATGCGTTGGTTAGACCTTTGACACTCCAAATTTTATATTCACACTTACAAACCAA TCCTAAGTTAAATATTTTATTTTTAAAATTTTTGATTGATCTATGAGGAGTCTTAATAGTTATTTGGTAGGTCCAATATCTTCACCCAAATTTGGTATGT ATTATGTTCACGTTGGAGCTTTCACACGATGCAGTGCATTTATTTTTTAATTGAACCAAGCTGAGTGGTACATTGGTGTAATCTGTAGTTTTTTTCTTTA GAAACTCACATAGTGTAGTTTTTAGTTCTCAATTCTGTCTGGGGTGACAGCATATTTGGATTATGTATGACAATTTCTTGTTGGTTATGTTGTAATGTTG ATACTCTTGTGTGATGTAGTCTTGATTGTCATAGCTGTTTGCTTGAAGCTGGTTCTTTTGTGGAGTGGATTCCTTTTTATGGATATATGCACTTATGTTT TTTTTGTTTAAGACTTCCTGAATCAGTTGTGTGCTGTAATATTGTACAGGGTCCTCCTGGTGGAAGGTCTGGTTTCGGTCGTGGTGCAGGTGGTTATGGA GC BLAST |
| Tissue | pods |
| Gene name | LI_gene_168487; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_483649
| Blastp | 40S ribosomal protein S10-2 from Oryza sativa with 82.05% of identity |
|---|---|
| Blastx | 40S ribosomal protein S10-3 from Arabidopsis with 89.58% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (4329619) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424423.1) |
| Pfam | Plectin/S10 domain (PF03501.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |