Ll_transcript_483650

• Id Trinity: TRINITY_DN49334_c0_g1_i7
• Name Transcript: Ll_transcript_483650
• Sequence: CGAAGAGATAAAAGGGTGCGAGAGAGTGTTATCGCTGAGTTCTTTTTCGTTGCCTCCTCCACCTTCGCAATCATGATCATTTCCGAGAAGAACCGTAAGG AGATCTCCAAATACCTCTTTCAAGAGGGAGTTTTATATGCAAAGAAGGACTTCAATTTGGCGAAGCACCCGGAGATAGATGTGCCAAATCTGCAGGTGAT TAAGTTGATGCAGAGTTTCAAGTCAAAGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACCAACGATGGTATCGAGTTCCTT AGGACTTACCTCAACCTCCCTTCTGAGATTGTCCCTGCCACTCTTAAGAAGCAGGCCAAGCCAGCTGGCAGACCCTTTGGTGGCCCTCCTGGTGATCGCC CTAGAGGCCCACCACGCTTTGATGGAGAAAGGAGATTTGGTGGTGACCGTGATGGATACCGTGGGGGTCCCCGAGCACCTACTGGTGACTTTGGAGGAGA GAAGGGTGGAGCTCCTGCTGACTACCGGCCTTCTTTTGGGGTAATTTTTTGCATTGTTTTTAATTTCAATACAAGAGTTGTGTTAATATTCTTATCCGAT TTGATTATGTGAAGTTCTGTAACCTTGTTCTTCATTATATTTGGCCTGTCTCGTTACATTTCCTCTGCTTTTGGATCTCATTACATTGTGCTCGACTTTT GAATTGATGCACAAACACATGTTAATAAAACCAAGTTGAGTGTTTTTTTTGGAGTTTGCCTATTGGTTTGGACTAGCAACTATAGTCTGATGATCTTGAG ACTACTTGTCATTTATATTATGTTATTAATATTCTTGTGTGAATCACGCTTGTCATAACTGTTTGTTTGAAGATACTTGTGTGGATTGGGTTTCTTTTTT ATAGATATATCTTTCTGTTTTTTATATTGTTTTACGCGGTTCTGAGTCAGTTTGTTTTCCTTTAATATTGTGCAGGGTCCTCCTGGTGGAAGGTCTGGGT TCGGTCGTGGTGCTGGTGGCTATGGAGCACCACCTCCTTCAAATGCTTAAATGTAATACTTTATGCTCCAGTTGTTGCGGTGTTAGTTATTCTGGCTGCC ACTGGAGTCAATATATTTCCCTCCCCCAAAGGTTGTTATGAGTTTGACATTTAAGTATTTTAGTATTCGGTTATTTATGCAATCAAGATTTTTGGATTCT TGTATCAATTTACTCAATTTTCGGTCATATTCTAATGTTTTATTCAATCCTAGACATTTTAGGGATAAGGTGATTTTGTATTTGATGTTCTATTTTACAG CACTCTAGATCTGTAATGAGCTTTCTTTGGTCTAATCACTTTTTTAAGAACCATGATATTAATACCCTGTAGAGTAGAGCGGTATTGTTTTAGTGGACCG GAGTTTATTAATCTTTTAATTCATTAAATGCTTTCCCTAGGATGATATTCAATTATGTTCCTACTTTCTTACCTTTGTGATAATGGTCTCAGGATCCAGG TTTTATATTGTAC
• Tissue: pods
• Gene name: LI_gene_168487;
• Additional information: details;

Expression of Ll_transcript_483650

FPKM

• PAB: 0.3
• PNAB: 1.3
• PS1: 0.4
• PS2: 0.5
• PS3: 0.7
• PW1: 0.1
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483650

• Blastp: 40S ribosomal protein S10-2 from Oryza sativa with 82.05% of identity
• Blastx: 40S ribosomal protein S10-2 from Oryza sativa with 81.41% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (4329619)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421657.1)
• Pfam: Plectin/S10 domain (PF03501.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;