| Id Trinity | TRINITY_DN49337_c0_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_484367 |
| Sequence | TGTGTATCGACAATCCCGTTTTTTGAATTTCCCTCTTTCCCTCCGTCGGATTTGGATCAGAGAAAGAATTCAAAGAGAAATAAATCTTGGAAGGTGAAGA ATCAACGAGAGGAAAAGTGGTGAATCGAGATTCCGTTGGAATTTCTCATAAGAAAATGCTAACTGACATAACCAACAACATCAAGGAGCAGAAGCAACAG CGGTGGCAAAAGTTGCCATTAAATCAACAATCGATGCAGAAAAAAACTGTATCTCTTTCTGCGAATGCCGACGTCTCTACGGATCAGCTTCTCAAGGAAA ATGCAATGTTGATGCAGCTTCTAGCTAATAGAAACGCGGTTATAGAATCATGTAAAGCAGAGCTGCAAAAGTCTCAAACCAAATTTCAGAAACTGCAGAA GCAAAATTCGGAACTTGCCCTGACAAATAGTCGAATGCTGACGGAACTTAATTCAAGTCGACCGAGGCTGAGGGAACTTCAACATGAACTAGTAATAAAA AATGGCATACTCAAAGCTATGAAATTAGAATTGATGGCTAAAGAGCACACAGAAAAATTGAAGCACGAAATTGATGCAAATGAGGTAGGAGCATCTCGGA GAAAACAGCCAGATGAAGATGACGGGGGGGATAATCCTTGCCACACAAAAAGGAAGAGAGTGTCAAAATCCCAATCTTCTGCACCTGCTGTCAAACATGT CAAACGCACGGGAACGGTTGACAACCAGAGATATTCTTTGAGAAGGCAATCAAAAGCTGAAAAATCAAGTCCAGCAGAAGACTTCTTTGAGGTAGATGAT ATCACATATAATGTCATGCATCCGCAAGAATGTTTGGCAAATGAAATTGAACAAACATCATTACCATCCAAAGTTCATGAAGAAGCCAGAGAAGATACTA AATCTTCAGGACCCACTAACAGTGAACAAATTCGTGCCAAAAAGAATATAGAAAAGAAGAGGAATAGTTTTAGAAGGCAATCGGCCAGGTTCAAGCCTGA GAATGTAGAACCAACTGAAGATTCCTTTGAGATAGATGATGCAAAATTTGTTATCTCCCGTTTATGTGATGATATGTCGGAAAAAAGTGATCCAACAACA TCAAGTTTAACTTCTGGAGAAGAAAACAATGCCTGTAAGTCTGATCCTTGGGAAATTCGAAGATCATCTGTTGGGAGGCCAATGCGTCAGTCAGTTGTGA AGATTCAATCTTACAAGGAAGTTCCACTTAACGTGAAGATGCGCAGACCTGCTTGAGCCAATTTTATATAAGCTTATGTAGATGGAGGAGTGCAATGCTA ACAGACGGATATAAAAAATGCAGCATCCCTTGGAACAAACGCTTATATTGATTGCAATCTGCAAAGGTCTGGTTGCTGTTGTAGCTATGTTTGAACCAAA AATACATTGGTATCTATGTTTTCTTCTCCATGTTTTAGTTGTCAAATATAAACTTGAAACTTTCACTACAGAATGATTATTTTATTTAATAAGGTAAAGG TGGTACATGTTGTACCAAGAAAGGAGATTATGTTGATCTTGCTTGATATATCTAATAATTGTATAACAATCTTTCTAACTATAAAAATCCCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_168502; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484367
| Blastp | SHUGOSHIN 2 from Arabidopsis with 29.78% of identity |
|---|---|
| Blastx | SHUGOSHIN 2 from Arabidopsis with 29.78% of identity |
| Eggnog | NA(ENOG410YNQ1) |
| Kegg | Link to kegg annotations (AT5G04320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459513.1) |
| Pfam | Shugoshin C terminus (PF07557.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |