Ll_transcript_483779

• Id Trinity: TRINITY_DN49340_c2_g2_i8
• Name Transcript: Ll_transcript_483779
• Sequence: CATAAGTCCACAATTGTTTCTTTTCTTAGTTGTATAAAATATTATAATCCAAAACTAATTTTTTCAATATAATAATCCAAAACTTTAGTGCTCTTTAATT TGCCTCTTTAGATCAACTTTGATACCAAAAATCTTATCTTTTTTCATTTGGGTTTCCATAGTTTCTCGAATTTTTCATTGCCATGGCTCCTAAAGATCCC AAGCAAGTTGCTGCTTCTGCTTCTGCTTCTGCAGCCTCTGCTAGTGGTGGTGGCTTTTTTGCTTCTATTGCTTCTACTTTGTCCAATTTTGGCAGTTCCA TGTCCAAATCTGTCAATGGTTTGGATGAAGGTCTAGAGGTCATTAATCCAGAAGGCGGAAATGAAGATGCCGAAGAGGAAGCGAAAAAAGGGAGATGGAA ACAAGAGGAACGGGACGGTTACTGGAAAATGATGCAAAAGTATGTAGGCTCTGATATCACATCTATGGTGACACTTCCGGTTATCATTTTTGAGCCGATG TCAATGTTACAGAGAATGGCTGAGCTTATGGAGTACTCTTACCTGTTAGATATGGCAGATGAAACTGAGGATCCTTATATGAGACTAGTATATGCTTCGT CATTCTTCATATCTGTGTATTATGCTTATCAACGAACATGGAAGCCATTCAATCCAATTCTCGGTGAGACTTACGAACTGGTGAATCATGGTGGCATATC ATTCATATCAGAGCAGGTCAGTCACCACCCTCCGATGTGCGCTGGGCATGCCGAAAATGAACATTTCACTTATGATGTGACATCAAAATTGAAAACGAAA TTTCTCGGAAACTCAGTTGATGTATATCCTGTTGGAAGAACACGTGTCACCCTCAAAAGAAGTGGCGTGGTCCTTGATTTGGTGCCTCCTCCTACAAAAG TTAGCAACTTGATTTTTGGACGAACTTGGATTGATTCACCGGGGGAGATGGTCCTAACGAATATAACAACCGGGGACAAAGTGGTGCTGTACTTTCAACC ATGTGGTTGGTTTGGAGCTGGTCGGTATGAAGTGGATGGATATGCATATAATTCTGATGACGAGCCCAAGATACTGATTACTGGAAAATGGAATGAAGCT ATGCACTATCAAGAATGTGACTCGGAGGGAGAGCCACTTGCAGGCACTGAACTGAAAGAGTCTTGGAGAGTTGCTGATATTCCCAAAAAGGACAAATTCC AGTACACATATTTTGCACACAAGCTCAACAGCTTCGACACTGCTCCTAAGAAGTTGTTGCCATCGGATTCTCGTCTACGTCCGGATAGATTGGCCCTTGA GAAAGGTGACCTATCCACATCTGGCTATGAGAAGAGCAGGTAACTACTCACTCCATTTACCCTCTCCACAAGCAAAAGATGAAGCCATAAGGGCTATAAT TTCGATTGCTTTTTATAATCATTACTCGAGACTCGAGAGATCTTAACTATGAAAGGTATTATCGGAAAATTTTACTTTTTTTATAACGCATCGCATGCCA ACTTTACTTTTTACAATGTGTAATACACGTACCATGCATCGTAAGAAGTAAAGTTGTTTGCGAAGTTGTCGAAAACTTACGAGTAACATTTTTGCTTCAT TCTTTACAATGTGTACTTAAACTTACTTTTCAGTTTGGAGGAGAGGCAGAGAGCTGAGAAGAGAAATAGAGAAGCCAAGGGTCAAAAGTTCACTCCTAGA TGGTTTGATTTAACAGATGAAGTAACTGCTACGCCTTGGGGCGACTTGGAAGTTTACCGATACAACGGTAAATATACGACACATCGTGCAGCTATCGATA GTTCCGAATGCATTGAGGAGCCTGACAGCAGAATTGAGTTCAACCCTTGGCAATTTGATAATTTGGATGCTCAATAAGCATCCTCTATTGAAATTCTTTC TATTTTTTTTGTCTGTCACTTTGTTATTAAGTTTGTAATGTATCTTTACATGAACAAATGTTTGATTTTTTTAATGTTTTTGTTGTGTTTTGTTATTCTA GTGTTTGATTAATTAATATTTAACCATGTTAGTTCAATTTGTAGAGGTATTATTACAGATTTACTCCATTTCTTATTTGATGAAAAAAATCCTATTTTCC T
• Tissue: pods
• Gene name: LI_gene_168514;
• Additional information: details;

Expression of Ll_transcript_483779

FPKM

• PAB: 1.1
• PNAB: 0.1
• PS1: 0
• PS2: 0.5
• PS3: 0.5
• PW1: 0
• PW2: 1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483779

• Blastp: Oxysterol-binding protein-related protein 3A from Arabidopsis with 81.77% of identity
• Blastx: Oxysterol-binding protein-related protein 3B from Arabidopsis with 77% of identity
• Eggnog: Oxysterol-binding protein(ENOG410XP9E)
• Kegg: Link to kegg annotations (AT5G02100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450235.1)
• Pfam: Oxysterol-binding protein (PF01237.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;