Ll_transcript_485139

• Id Trinity: TRINITY_DN49344_c0_g1_i10
• Name Transcript: Ll_transcript_485139
• Sequence: ATTGGATCAAATGACAAGGACATTGTTAAGAAAAAGTAAAGGAGCATCCACACGTCGGTAAGAGATAAGTTAGTTCTTTTATGTGTGAGAAAATTTTACT TCATATCCTAGCCATCTAATGGATTTTTCTGTTCTAATACTCTACCCGAGAGTTATCAATATTTATCAAATCCGTTCCTATCTAACGGAATGCTATTGGA TCAAATGATAAAAGACATTGTTAAGAAAACAAAGTATTGAGTATCCTAGACTTCATGTATAACCAAATGAAGTAAATTTTTTTGTACTTCCAAATGTATC TCCTCATTTTGTCGGGTAAATAACTAATATCTTTCGTGATTGCCCTGATAACAAACTTTGGACATGCAATAAAAACTTAGCACCATTATATACATCTTAT TCTCCTTGCCATTCCAAGAAATTCCATTTTCTATAACGCGATCTTGGATTCTCTTTTCCTTCTTATCTTTCAATTCCAGATTCTAATGGCAACTACCACC ACCGACACCACCCAGAACCCTAATCTCAACGACAACCCTCCACAAGAGGAAAACCTGACCATAACCCTTGACCCCACCGAACCCAAACCCGACCTAGCCC TCTCAGAACAACCAACCCCCGCTACTGCCGCCGACAACGATGCCGCCGCCGCTGAATCTAAGGTTTCTCCGACGACTGCTCCGATTTCCGATGCCCAGAA GAAGAAAATCCGTGCTGAGCGATTTGGGATTACTGTTCAATTGTCTGAGAAGGATAAACGCAATTCCCGAGCTGAAAGGTTTGGCACTAGTTCCACAACA CAGGGATCAGAGACTTCAAAATCAGAGGAGCTGAAGAGGAAGGCTAGAGCAGAGAGGTTTGGGATACCTAGTCCAACCACAACTGCTGATGAGAAGGCAA AGAAGAAAACCCGGCTTGCTAGGTTTGCACCAGCTTCTAAGGCTGCTGCTGATCCTGCTGAGGAAGATAAAAGGAAAGCAAGAGCACTCAGGTTTTCGAA TCAATCATCAGGCTCCTCGACACAAGTTAACAGCAAGGGAAACATTGAGCCAAAGGTGGTTATTGCAGGCAAAGCCGGAGGAGGAGATTGAATGGAAGCT TGCATTTTTAGTTGTAGGAATTTTCTTTTCTAGCTTTTTAATAGTTCAAGTTCTCAGAGTGGCCTCCAGACCTCCACACCCTATCTACTTTTGAACTTAT TAATCCCCAGATACTTCTATCTTTCATTTGTGAGGTGATGCCTTCCTCTAAGACGCGGCAAAGATTCGGATGTGTGAAGAAGCTTGCTTTTGTTGTCTTA GTATGGGCTTACTAAGTGATACCTTGGGGTAATTAATGTCATCTTCATAGTGTTACTTATCTTAAAATCTGCAAAGATTTGAATTTTTGGAATCTACAGC AGCCTTAACTTTTTTATAAAAAATATGGATGAAGCCTTTCAGAAAGAAAACTTATTTCTTTTTTAATTTTTCCATCTTTATCATTGCCATCCACCCAGTG TCTCTAATCTGCTGCTTGTCAAATGCTCATCATTCGTTCTCACTAAGCCCGAAGGTAGTACCAGATTAGTTTTGTTATACCATCAATGTGCTGATCCAGA ATTCATTTATGTTTGAGAGGTAGTGATAAATTGAAAAGATAAGCCCTCAAATATAGAATAGTTTGCATATAGGGTGGGGATGACATTTTTATTTTGGGTA GTGTTTGAATTGGCATTATTTCATCATATATGAGTAATGTTGGTTCGTTTTTTGTTATTTGACTAAGTATAGGTTCAATTTCTCACTAACATAAAAAAAA AGTAAAAACAGAAATAATTTTTTTAGCACTTATATATGAAGTTACTTTTACTGAACCCCTTGTCCTTTTCTGTGTTTAGTTGATGTGTGCATATGGATAC TATTGCATACATTCTTTTAGAGTTCTATCAGGTTTAGATCATATTGGAAAGTAGTAATTAAAGGAGGTGTTTAATAGGTAACATGATGTTCCTAGGAAAG GGATAAATAGACTATGTTTTGGTGCATGAAAAAAAATTATTGCTTTCGGTGTAGTGGTAGTGCACTATCTTTCTGCTTTCTGGATCAGCAAAGGTGGGGA ATTTTATGTTCCTGGTACTATCTTCTGGTGCCCTCGAGAAAATCGGTGTAATATGGCAAGCTAAATGTTTCAAATAAAAAGTTGAAGGCAATATCTGAGT TCTATTAATGTTTTAAAGTAGTTCTAAAACTAAGGCTATTTCTCAAGGCTGTAGTTTCCAGTATTACAATATCTTTGCTGTCATATTGAGATAAGTAAGC TCTTTGAAGATGTTATGTAGTTTGGTTTCTGTAACTTGAATTATAAGATTGGATGTGGAGGAACTCTTCTATTTTTTTCTTATTTATTATCTTGTAATTT ATTTTTAAGTTTTTTGTTTGGACCAAAGCTATGGAGTTAACCATATTCTGGGGTTGAACTTTTGCTAGCTAGTCAAGTATATATAAATGTGGACCCTTTT CCTTGTTGTGGAGCATTCAGAATATTCTTTTGTAGTCTTTTAATTTTTTGTCGGATATTATCATGAAATGGATGACGTTCATGGCAAACCTAGTGTTTTG TTGTCTGCACGGTTAGCCCATTACATTGGCTTGGTGTGTAAAACACTGTTTCATTTCTTAATTTTATAGAAATGAAACTGTTTTGCTGTTTTTTGCATGC TATGCAATTGAAGGCTTTTCG
• Tissue: pods
• Gene name: LI_gene_168554;
• Additional information: details;

Expression of Ll_transcript_485139

FPKM

• PAB: 33.2
• PNAB: 27.7
• PS1: 33.7
• PS2: 25.1
• PS3: 32
• PW1: 24.5
• PW2: 28.6
• PW3: 28.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485139

• Blastp: Protein MODIFIER OF SNC1 11 from Arabidopsis with 61.16% of identity
• Blastx: Protein MODIFIER OF SNC1 11 from Arabidopsis with 57.53% of identity
• Eggnog: NA(ENOG410Y0Z2)
• Kegg: Link to kegg annotations (AT5G02770)
• CantataDB: Link to cantataDB annotations (CNT0001988)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456431.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;