Id Trinity | TRINITY_DN49344_c0_g1_i7 |
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Name Transcript | Ll_transcript_485122 |
Sequence | ATTGGATCAAATGACAAGGACATTGTTAAGAAAAAGTAAAGGAGCATCCACACGTCGGTAAGAGATAAGTTAGTTCTTTTATGTGTGAGAAAATTTTACT TCATATCCTAGCCATCTAATGGATTTTTCTGTTCTAATACTCTACCCGAGAGTTATCAATATTTATCAAATCCGTTCCTATCTAACGGAATGCTATTGGA TCAAATGATAAAAGACATTGTTAAGAAAACAAAGTATTGAGTATCCTAGACTTCATGTATAACCAAATGAAGTAAATTTTTTTGTACTTCCAAATGTATC TCCTCATTTTGTCGGGTAAATAACTAATATCTTTCGTGATTGCCCTGATAACAAACTTTGGACATGCAATAAAAACTTAGCACCATTATATACATCTTAT TCTCCTTGCCATTCCAAGAAATTCCATTTTCTATAACGCGATCTTGGATTCTCTTTTCCTTCTTATCTTTCAATTCCAGATTCTAATGGCAACTACCACC ACCGACACCACCCAGAACCCTAATCTCAACGACAACCCTCCACAAGAGGAAAACCTGACCATAACCCTTGACCCCACCGAACCCAAACCCGACCTAGCCC TCTCAGAACAACCAACCCCCGCTACTGCCGCCGACAACGATGCCGCCGCCGCTGAATCTAAGGTTTCTCCGACGACTGCTCCGATTTCCGATGCCCAGAA GAAGAAAATCCGTGCTGAGCGATTTGGGATTACTGTTCAATTGTCTGAGAAGGATAAACGCAATTCCCGAGCTGAAAGGTTTCACCTTTTCTCCATAAAA AAATTAGGGTTATTATGTGATTAAATTAGGGTTTCAAAGTTTTTTTAGATATCTGTGGATTTTGATCTGAAATTGATTTTGATTATCTAATATACATTCA ATAATTTAAGATGTTGTTGTAGTTAAGACTCCCCTAGATAAAAAGTCAATAGTTTGGTTCCTGTTATTGACACTTGTTATGAGGGATGACCAAAAAGTCG AGAGTTCGGATTCGGTTCCTGTTATTGGCACTTGTTACGAGGGATGACCAGAGACCTCGAACGAGATTAGTTCTTCAGGTGATACCCTTGTTAGTACCAA AAAAATGATTCACATCATGCCGCTTTTTCGTAAAGCTAATTGGATAGGTATTATGGCACCCTTTTAGTTTCGAATGACGGAATTGATATGTGTGTGTTGA TTTCAGGTTTGGCACTAGTTCCACAACACAGGGATCAGAGACTTCAAAATCAGAGGAGCTGAAGAGGAAGGCTAGAGCAGAGAGGTTTGGGATACCTAGT CCAACCACAACTGCTGATGAGAAGGCAAAGAAGAAAACCCGGCTTGCTAGGTTTGCACCAGCTTCTAAGGCTGCTGCTGATCCTGCTGAGGAAGATAAAA GAAAAGCAAGAGCACTCAGGTTTTCAAATTCATCATCAGGTTCCCTGTCACAAGTTAACAGCAAGGGAAGAATTGAGCCAGATGCGGTTATTGCAGGCAA AGCTGGAGGAGGAGATTGAACCGTAGCTTGTATTTTTAGTTGTAGGAAATTTTATGTTCTAGTTTTTTAATAGTTCAAGTTCCTAGAGTGGCCTCCAGTC CTCCACACCATATCTACTTTTCAACATATTAACCCCAGATGCATCTATCTTCACTTGTGAAGTGAGGTCTTCCTCTAAACCATGGCAAAGATTCAAATGG TATAAAGAAGCTTGCTTTTGTTTTATCTTAGTGTTGGCTTACCAGTTGACACCTTTTGGTAATTAATGCCATCTTCATAGTGTTAACTATCTTAAAATAT GCGAAGATTTGATTTTTTGGAGTCTGCAGCCTTAATTTTTTTAATATAAAAGAATGGAGAAAGCCTTTGCATAAAGGAAACTTATTTCTTTTTAAATCTC TTCCATATTTATCATGGCCATCCACCCAGTGTCTCTAATCTCCAGCATGTTAAATGCTCATCATCTGTTATCCCTAAGCCTGAAGGTAGTACCAGATTAA TTGTTATACCATCAATGTGCTGATCCAGAATCTGCTTATGTTTGAGGAATGGTGATAAATTGAGAAGATAAGCCCTCAAATATAGAGTAGTTTGCATACA GGGTAGAGTTGACATTTGTTGTTTGGGTAGTGTTAGAATTGACATTACTTAATCATCAATGAGTAATGTTAGTTCTGTTTTCCTTTTCTGCTTTTGACTA GATATAAGTTCAATTTCTCACTAACTACAAAAAGTGAAAATATAAATAGATTTTTGGCTGCATTTTTACTCATATGAAGTTTCCCTCCCTTAATCTGTTT GTCCTTTTCTGAGTTGTTAGTTGATGTATGTACATGGCTACTACTGCATACATTCTTTTAGAGTTCTAGCATGCTTAGATCATATTGGCAAGTAGTGATT GAAGGACATGCTTGATAGGTAGCTTGATGTTCATAGAAAAGGGATTGATAGACTATGTTTTGGTGATTGAAAAAAATTATCGCTTTTGGTGTAGTGGCAA TACAGTATATTTCTGGATCAGCATAGGTGGTGAGTTTTATGTTCCTGGTATTATCTTCTGGCAGCCTCGAGAAAATGGATGAAATATGGTAAGCCAAATG TTTAAAATGAAAACATGAAGGTGTGCCCAAGTTCTGTTAATGTTTTCAAGTAGTTCTAAAACTAAGGCTATTTCCCAAGGCTGTAGCTTCCAAAATTTCA GAATCTTTGCTGTTATATTGAGATAATTAAACCCTTCGATGATGTTTCTTCGTTTGGTTTCCACAATTTAGAATTATCATCGCATTGAATGTGGCGGGAA CTCTTCAATTTTTTTTGCTTGATTATTACCCTGTAATTTAATGTCAAGTTTTTTGTTTGGATCGAAGTTGAGAGGTCATTCTCATTCTGGGGTTGAACTT GTGTTAGCTAGTCAAGTATATATAAATGGAGGACCTTTTCCTTATTGTGGAGCATTCAGAATATTCTTTTGTAGTCTTTTAATTTTTTGTCGGATATTAT CATGAAATGGATGACGTTCATGGCAAACCTAGTGTTTTGTTGTCTGCACGGTTAGCCCATTACATTGGCTTGGTGTGTAAAACACTGTTTCATTTCTTAA TTTTATAGAAATGAAACTGTTTTGCTGTTTTTTGCATGCTATGCAATTGAAGGCTTTTCG BLAST |
Tissue | pods |
Gene name | LI_gene_168554; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_485122
Blastp | Protein MODIFIER OF SNC1 11 from Arabidopsis with 60% of identity |
---|---|
Blastx | Protein Ycf2 from Lotus with 76.32% of identity |
Eggnog | NA(ENOG410Y0Z2) |
Kegg | Link to kegg annotations (AT5G02770) |
CantataDB | Link to cantataDB annotations (CNT0001988) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456431.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |