Ll_transcript_484473

• Id Trinity: TRINITY_DN49348_c1_g1_i1
• Name Transcript: Ll_transcript_484473
• Sequence: AGTAGTTCTTGGTTAACTGCTGTGAAAAGGGCATTCAGATCTCCAACAAAAGATAGTGACAAAAGTAGTAGAAGAAGAGAGGACCATGATCATGAAGAAG ATGAAGAAAAGAAGAGAGAAAAGAGAAGATGGATTTTCAGAAAGAATCATGAAATAGTGAACACTCAACAAACTCCAACAAAGTTGAAGCATGATGTGGC TACTACAACAGATACAAGTGTGGCTTCAAGGACAGACCAAGATCAGAAGCATGCACTTGCAATGGCTGTGGCCACAGCTGAGGCTGCTATGGCCACTGCT CAAGCTGCTGTGGAAGTTGCAAGGTTGACCAACCCTATTAGTACTACTAACCATCATGCTAGGGACCATTTTGCTGCTATTGTGATTCAGACTGCTTTTA GAGGATATTTGGCAAGAAGAGCGCTTCGTGCACTTAAAGGGTTGGTGAAGTTGCAAGCTTTGGTAAGGGGCCACAATGTTAGGAAGCAGGCAAAGATGAC CCTTAGGTGTATGCAGGCTTTGGTTAGAGTACAAGCAAGGGTGCTTGATCAGCGCATAAGGTCTTCGCTTGATGGTAGTAGAAAATCTACCTTCAGTGAC ACCACCAGCGTTTGGGAATCGCGGTATCATCAGGAAATTTCAGATAGGAAATCAGTATCAAGAGAGGGAAGCAGCGTTGCGGATGATTGGGATGAAAGGC CACACACAGTTGAAGAAGTTAAGGCTATGTTGCAGCAAAGGAAGGAAGCAGCTATGAAGCGAGAAAAGTCCTTGTCTCAAGCCTTTTCACAACAGATTTG GAGGAATTGTAGGACACCATCAATTGGAAATGAAGATGAGCTGGACGAGAGGCCAAAATGGCTCGACCGATGGATGTCTACAAAGCCATGGGAGGGTCGG GGAAGAGCTTCAACTGATCAAAGAGACACCATTAAGACTGTAGAAATTGACACCGTTCAGCCTTACTCATACCTAGGAGCCAGTTACAGAAGATCACATC CAAATTATCAATATAACCCACACCACCAACCACAAAGACATTCCATTGCTTCCCCTATCCATGGAACCCACCAAAATGGATCTATTCACCAATCCACTGC AACTCCATCTCCAGCAAAATCAAGACCCATCCAAGTCCGGTCTGTGAGCCCTCGCTGCGTTAGAGAAGATAGAACCTTCCACACGTCCCAAACGCCAAGC CTCAGGTCTACTTATAATTACACTGGGAACTTGTATCATAATGGGAGTGCTGGAACAAGTAATGCCGCTGCTGCTGCTGCTGCATTGCCTAATTACATGG CTGCAACCGAGTCCGCAAAGGCTCGAATTCGATCTCAGAGCGCTCCGAGGCAGAGGCCATCAACACCAGAGAGGGACAGAGGATCTGGATCAGTTAAGAA AAGGCTTTCTTTCCCGGCTCCAGATCCTTATAATCTAGGAGCTGGTTATGGAAACTATGGGCAGAACTTAAGGAGTCCAAGCTTCAAGAGTGTAGGTGCG TCACATTTTGGTATGGAACGGCAATCCAACTACTCTTCTTGCTGCACTGAGAGTAATGGTGGAGAGATTTCTCCTTCTTCAACCAGTGACCTTAGACGAT GGTTGAGATGATTTGTTGACTAATTTGATCAGTGTGAGAACTGAGAACTAATGAATTGTGACTTATTAGGTTATTACCATCACTTGTTATTTTTAATTTA GGCTTTTGTGATATTAGAGTTATTATAGTGCTAGTTAAGCCCAGAAAGAGAGAAAGTTATGCAGGGTTTACTGAATATGATGTAGGAGAAGAGGAGAATG TATTTTCTTGATACTTGCTAAAATGCTGAGAGACATTGATGTGTTGTATCATTTGTTTTGATTACTTTTGCTAGGATTGAAGATAAAAGTGAGCCCTATG TGGTGGCCTACCTCACTTGGGATGTTGTATTTGATGTTGAAAGAATTGCCTATACCATTGAATGGCCATTATTGGACTGTCCTGTCATAGTAACATGTAA TATCTTGCATTCTAGCTTTACAGCATCCCCATTTTAAGGCAATTGACAG
• Tissue: pods
• Gene name: LI_gene_168593;
• Additional information: details;

Expression of Ll_transcript_484473

FPKM

• PAB: 1.6
• PNAB: 12.4
• PS1: 14
• PS2: 5.9
• PS3: 7.8
• PW1: 4.8
• PW2: 3.6
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484473

• Blastp: Protein IQ-DOMAIN 14 from Arabidopsis with 28.13% of identity
• Blastx: Protein IQ-DOMAIN 14 from Arabidopsis with 28.13% of identity
• Eggnog: IQ calmodulin-binding motif(ENOG4111DSA)
• Kegg: Link to kegg annotations (AT2G43680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421841.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;