Ll_transcript_484487

• Id Trinity: TRINITY_DN49348_c1_g1_i11
• Name Transcript: Ll_transcript_484487
• Sequence: TGTGGCATGTTGTTATTGGTTTGGTACAGGTTTTGGGACAGAGTTTGGGACAGCAGATCCTGGTCCATCTTCTAACACTTCCATTAACATTTAATAAACC AACTTATGTTACGTACTTTGAACCATGTATGTTCAACATAATCTTGAGCATGATTTTTCTTTCTTATTTTAAAACTGTATTTATATCTTCCTACAATCCA TTAAATGAGAGTTTTGGGCCTCCCAATTTTATGTCATGTTGGTCAAAATCATTTCATTCATCACTCTATTCAACTTGCTAATAACAAGTTTGAAAGAACA CAAGTTAATAAAAACCATTTAATTAAATTTTGTCTACGGTTTTTGTGTGAGGGTGATTTAGATTTTTCAGCATATAAGAGATTCGTTCATTTATTTTACA GTATCGAGGGGACTCACTGCAGAGCCATGATGAGCACAAGTTCACTGTAGCATTGATGAACTTGTACAGATAAAAATGATTAACAGTGAATCAGTGATAC ACTATTATATGCTTTGTCTCTCCTTGTTGTTTTTCTGTCTTTAACTCTTGTATGATATCTTTAACTCTTGTACAATTTTCTGGCTTTTTATGAGGCTGTG TTTTTTGACAATTTAGCAGTAAATGCAATTGAGTTTTACTGTTCATTTTGATGGGGAAGAAGGGAAGTAGTTCTTGGTTAAATGCTGTGAAAAGGGCATT CAGATCTCCCACCAAAGACAGTGACAAAAGGAGTAGCAGAAGAAAAGAGGATTATGATCAAGAAGAAGATGAAGAGAAGAAGAGAGAAAAAAGATGGATT TTCAGAAAGAATCATGAAACAGTGAGCACAAAACAAACTCCAACAAAGTTGAAGCATGATGTGGCTGCTGCAACAACAAATGCAAGTGTGGCCTCGAGGA CTGACCATGATCATAAGCATGCACTTGCAATGGCTCTGGCCACCGCCGAGGCTGCTATGGCCACCGCACAAGCTGCTATAGAGGGTGCAAGGTTGACCAA GCCTAGTGCTAATAATAATAATCATGTCAGGGACCATTTTGCTGCTGTTGTGATTCAAACTGCTTTTAGAGGATATTTGGCTAGAAGAGCACTTTGTGCG CTTAAGGGGCTGGTGAAGTTGCAAGCTTTGGTAAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTAC AAGCAAGGGTTCTTGATCAGCGCATAAGGTCTTCACATGATGGTAGTCGAAAATCTACCTTCAGTGACACCGCCAGTGTTTCGGAATTGCGATATCTTCA GGAGATTTCAGATAGGAAATCAGTATCAAGAGAAGGAAGCAGCATTGTAGATGATTGGGATGAAAGGCCACACACAGTTGAAGAAGTTAAGGCTATGTTG CAGCAGAGGAAGGAAGCAGCTATGAAGCGAGAAAAGTCCTTGTCTCAAGCCTTTTCGCAACAGATTTGGAGGAACGGTAGGAAATCGTCAATTGGAAATG AAGATGAGCTAGAAGAGAGGCCGAAATGGCTCGACCCGTGGATGGCTACAAAGCCATGGGAGGGCAGGGGAAGAGCTTCAACTGATCAGAGAGACCCCAT TAAGACTGTGGAAATTGACACTGCTCAGCCTTACTCATATCTAGGAGGAGCCAATTACAGAAGATCACATCCAAATTATCAATATAACCCACACCACCAA CCACAAAGACATTCCATAGCTACCCCTATCCACAGAACCCACCAAAATGGATCAATTCGCGAATCCCCTTCAACCCCGTCACCAGCTAAATCAAGACCGG TACAAGTCCGGTCCGCAAGCCCTCGCTGTGTTAGAGAAGATAGAACCTTACACATCTCCCAAACACCAAGCCTTAGGTCTACTTACAGTTACACAGGGAA CTTGTACCAAAATGGAAGGGCGGGAACAAGTAATGGCAGTGCTGCTGCATTGCCTAATTACATGGCTGCAACCGAGTCTGCAAAAGCTCGAATTCGATCG CAGAGTGCGCCAAGGCAGAGACCATCGACACCAGAGAGGGAGAGAGGAACTGGATCAGTTAAGAAAAGGCTTTGTTTCCCAGCTCCAGATCCTTATAATC TAGGAACTGGTTATGGGAATTACGGGCAGAGTTTAAGGAGTCCAAGCTTCAAGAGTGTATGTGCATCACATTTTGGAATGGAACAGCAATCCAACTACTC TTCTTGCTACACTGAGAGTATTGGTGGAGAGATTTCTCCTTCTTCAAATAGTGACCTTAGAAGGTGGCTTAGGTGATTTGTTGAATGATTTGATAACAAA GCATGAGAACTAATGAACTATGACTCACTAAGTTATTACCTTTCACATGCTATTTCTAATTCAGGCTTTTGTGATGTTAGAGTTATTTTAGTAATCAGTT AACCCTTTCACCCCTAAATAGAGCAAGTACTTCCATGCTAATAAGCTGAGACATTGATGTGTAGTATCATTTGTTTTTAATACTTTTGATAGGATTGAAG AAAAAAGTGAGCCCTATGTGGTGGCCTACCTCACTTGGGATGTTGTATTTGATGTTGAAAGAATTGCCTATACCATTGAATGGCCTTGATTGGAATGTCC TGTCATAGTAACATAACATGTAACATCTTGTATTTTAGCTATTGCTTGTGGTTAATTAGCAATGTACAGCACCC
• Tissue: pods
• Gene name: LI_gene_168593;
• Additional information: details;

Expression of Ll_transcript_484487

FPKM

• PAB: 0
• PNAB: 3.2
• PS1: 0.7
• PS2: 2.8
• PS3: 1.2
• PW1: 0.3
• PW2: 0.8
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484487

• Blastp: Protein IQ-DOMAIN 14 from Arabidopsis with 27.97% of identity
• Blastx: Protein IQ-DOMAIN 14 from Arabidopsis with 27.97% of identity
• Eggnog: IQ calmodulin-binding motif(ENOG4111DSA)
• Kegg: Link to kegg annotations (AT2G43680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461226.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;