Ll_transcript_484479

• Id Trinity: TRINITY_DN49348_c1_g1_i5
• Name Transcript: Ll_transcript_484479
• Sequence: AAAATTTATAAGATTATAGTATACTACTGTACTTTTATACGGTTTGGCTCCTCTTGTTTTTCCTTCCTCTTTACTTTTTCTCTCCTCTTAGTCAGACACT GTTAAAAGACTTTGGTTGGGTGGCATTAGTACCCAACCTGGTTGGAACTTTCGGTCTTTAACTCTTGCACACAATTTTCTGGCTCTATCTGAGGCTGTGT TTTTTGGAAATTTAGCTGTAAATGCATTTGAGTTTTACTGTACATTTTGATGGGGAAGAAGGGAAGTAGTTCTTGGTTAAATGCTGTGAAAAGGGCATTC AGATCTCCCACCAAAGACAGTGACAAAAGGAGTAGCAGAAGAAAAGAGGATTATGATCAAGAAGAAGATGAAGAGAAGAAGAGAGAAAAAAGATGGATTT TCAGAAAGAATCATGAAACAGTGAGCACAAAACAAACTCCAACAAAGTTGAAGCATGATGTGGCTGCTGCAACAACAAATGCAAGTGTGGCCTCGAGGAC TGACCATGATCATAAGCATGCACTTGCAATGGCTCTGGCCACCGCCGAGGCTGCTATGGCCACCGCACAAGCTGCTATAGAGGGTGCAAGGTTGACCAAG CCTAGTGCTAATAATAATAATCATGTCAGGGACCATTTTGCTGCTGTTGTGATTCAAACTGCTTTTAGAGGATATTTGGCTAGAAGAGCACTTTGTGCGC TTAAGGGGCTGGTGAAGTTGCAAGCTTTGGTAAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGATGCATGCAGGCTTTGGTTAGAGTACA AGCAAGGGTTCTTGATCAGCGCATAAGGTCTTCACATGATGGTAGTCGAAAATCTACCTTCAGTGACACCGCCAGTGTTTCGGAATTGCGATATCTTCAG GAGATTTCAGATAGGAAATCAGTATCAAGAGAAGGAAGCAGCATTGTAGATGATTGGGATGAAAGGCCACACACAGTTGAAGAAGTTAAGGCTATGTTGC AGCAGAGGAAGGAAGCAGCTATGAAGCGAGAAAAGTCCTTGTCTCAAGCCTTTTCGCAACAGATTTGGAGGAACGGTAGGAAATCGTCAATTGGAAATGA AGATGAGCTAGAAGAGAGGCCGAAATGGCTCGACCCGTGGATGGCTACAAAGCCATGGGAGGGCAGGGGAAGAGCTTCAACTGATCAGAGAGACCCCATT AAGACTGTGGAAATTGACACTGCTCAGCCTTACTCATATCTAGGAGGAGCCAATTACAGAAGATCACATCCAAATTATCAATATAACCCACACCACCAAC CACAAAGACATTCCATAGCTACCCCTATCCACAGAACCCACCAAAATGGATCAATTCGCGAATCCCCTTCAACCCCGTCACCAGCTAAATCAAGACCGGT ACAAGTCCGGTCCGCAAGCCCTCGCTGTGTTAGAGAAGATAGAACCTTACACATCTCCCAAACACCAAGCCTTAGGTCTACTTACAGTTACACAGGGAAC TTGTACCAAAATGGAAGGGCGGGAACAAGTAATGGCAGTGCTGCTGCATTGCCTAATTACATGGCTGCAACCGAGTCTGCAAAAGCTCGAATTCGATCGC AGAGTGCGCCAAGGCAGAGACCATCGACACCAGAGAGGGAGAGAGGAACTGGATCAGTTAAGAAAAGGCTTTGTTTCCCAGCTCCAGATCCTTATAATCT AGGAACTGGTTATGGGAATTACGGGCAGAGTTTAAGGAGTCCAAGCTTCAAGAGTGTATGTGCATCACATTTTGGAATGGAACAGCAATCCAACTACTCT TCTTGCTACACTGAGAGTATTGGTGGAGAGATTTCTCCTTCTTCAAATAGTGACCTTAGAAGGTGGCTTAGGTGATTTGTTGAATGATTTGATAACAAAG CATGAGAACTAATGAACTATGACTCACTAAGTTATTACCTTTCACATGCTATTTCTAATTCAGGCTTTTGTGATGTTAGAGTTATTTTAGTAATCAGTTA ACCCTTTCACCCCTAAATAGAGCAAGTACTTCCATGCTAATAAGCTGAGACATTGATGTGTAGTATCATTTGTTTTTAATACTTTTGATAGGATTGAAGA AAAAAGTGAGCCCTATGTGGTGGC
• Tissue: pods
• Gene name: LI_gene_168593;
• Additional information: details;

Expression of Ll_transcript_484479

FPKM

• PAB: 0
• PNAB: 0
• PS1: 1.9
• PS2: 1.5
• PS3: 0.6
• PW1: 0.8
• PW2: 0.5
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484479

• Blastp: Protein IQ-DOMAIN 14 from Arabidopsis with 27.97% of identity
• Blastx: Protein IQ-DOMAIN 14 from Arabidopsis with 27.97% of identity
• Eggnog: IQ calmodulin-binding motif(ENOG4111DSA)
• Kegg: Link to kegg annotations (AT2G43680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461226.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;