| Id Trinity | TRINITY_DN49356_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_483635 |
| Sequence | CTCTACAACGCATCGAAAAATGCGACAACTCAGTATTGTGTCCTTTTTCGCTCTCCACTTTCATTTCAATTCTTCATCTCTTTCAACAACACCCCACAAC AAATAAACCTATCCAAACCCTAGAAATCACTGCGCTTAACCCCCCTTGAAACGCTGTCGTTTTTTTGTTTTCTTTGAAAACAAAGTGGGAAAACACAAAT CTGGGTCTTTTTCATTAACGGCTAAATTTGTTGTTCTCTTCACTTCAAGTTTTGTTCTTTTGCTCAATTCCGAACCCTAACTCGAAAATCTGTAGTGGGT CTTTTGATTCGGTTAGGGTAAAGATGACATCTTTGAGCAGGGAACTGGCGTTCTTGATTTTGCAATTTCTCGAGGAAGAGAAATTCAAGGAGACCGTGCA CAAGCTGGAGCAAGAATCTGGTTACTTCTTCAACATGAAGTATTTCGAAGAGAAAGCTTTGGCTGGGGATTGGGATGAGGTTGAGAAATACCTTTCTGGT TTTATCAAAGTAGATGACAACCGCTACTCCATGAAGATATTCTTTGAGATTAGGAAGCAGAAGTATCTTGAAGCCCTGGACAGTAATGATAAAGCAAAGG CGCTTGACATACTGCTGAAGGATTTGAAAGTTTTTTCGACATTTAATGAAGATTTGTTCAAGGAAATGACACACCTCTTAACTCTTGATAACTTCAGGAA TAATGAGCAGTTATCGAAGTACACTGATTCACAATCAGCTCGAAGCATAATGCTCGTGGAGCTTAAGAAATTGATTGAAGCAAATCCCCTGTTTAGAGAC AAGCTTATATTCCCTTCGTTGAAGGCCTCACGGTTGCGTACCCTGATTAATCAAAGTTTGAATTGGCAGCACCAGCTATGCAAGAACCCGAGGTCAAATC CAGACATAAAATCTCTATTCACTGACCACACTTGTTCACCTCCTCCAAATGGAGCTCGTGCATCTACTCCTGTCACTCCTCCCATCACAGCTGTTGCAAA ACCTTCATTTTATGCTCCACTTGGAGCACATGGTGGACAATTTCCACCGGCCCCAACAGCTGGAAACGTTAATGCTTTAGCGGGATGGATGGTGAATCCA AATCCTTCTTCATCCATTCAGTCACCTTTACTTGGTGCTTCCTTATTTCCCGGCCATCCAAATCAAGTCCCTGTTTTGAAACATCCAAGAACACATTCTA ATGCTCTTGGAATGATGGATTATCATAATGCTGATCATGAGCAAATGACGAAACGGTTGAAGTTATCACAATCTGTTGACGAGGTTACTTATCCCGCTCC ACCCCAGCAAGCCTCCTATTCACTCGATGACATTCCTAGAACTGTTGTTTGTACGTTGCATCAAGGCACAACAGTGTCAAGCATGGATTTTCATCCTTCC ATACATTCTTTACTTGCTGTTGGTTGCATAAATGGTGAACTTTCACTCTGGGAAGCAGGGCTGAGAGAGAGGCTGATATCAAAGCCATTCAAAGTAAAGG ACATTGCTGCTTGTTCTGTCTTTTTTCAGGCTGCAATTGTGAAGGATTCACCTATATCTGTCACTCGTGTATCATGGAGTCCAGATGGAAATTTTGTCGG GGTGGCTTTCTCAAGACACTTGATTCATTTGTATGCTTATCAAGGCCCTAATGATCTACGACACCATTTGGAGATTGATGCTCATGTTGGTGGTGTTAAT GACTTGACATTTTCTTATCCAAACAAACAACTATGCATTGTAACTTGTGGAGATGATATGTTAATAAAGGTGTGGGATTTGACTGGACGAAAGCTGTTTA ATTTTGAAGGTCATGAAGGACCAGTTCATTCTGTTTGTCCCCACCAGAAGGAAAGTATCCAGTTTATATTTTCAACTGCTGCTGATGGAAAAATCAAGGC CTGGCTGTATGATAATGCAGGCTCCAGGGTTGACTATGATGCTCCTGGACAGTGGTGCACCAGAATGTCATATAGCGCTGATGGAAATAGATTGTTTTCC TGTGGGACAAGTCGAGATGGGGATTCTTTCCTAGTTGAGTGGAATGAAAGTGAAGGAGCACTTAAGAGAACATATTCAGGGTTTAGAAAGAAATCTGTTG GAATTGTGCAATTCGACACAGCAAAGAATCGCTTTCTGGCAGCTGGTGAAGATAATCAGATAAAGTTTTGGGATATGGACAATACCAATGTTCTGACAAG TACAGATGCTGAGGGTGGTCTTCCTAGTCTCCCTCGCTTGAGGTTCAATAAGGAAGGAAATCTTCTTGCGGTTACTACAACAGACGGCGGTGTTAAAATA CTTGTTAATGCCAATGGCATGAAGTACTTAAGAGCCATAGAAGCTCGGTCTTATGAAGCATCTAAAGTTGGATCATCTATGGCTTCAAATATCAATCCGC TCATCAATAAAGTAGAACATGTTGATAGAAGTTCTCACGCTGTTCCGTCAGTCCTTAATGGAGTTGGTTCTATGGCTCAAAGCATAGAGAAGCAAAGGAG TTTGGACAAGGCAGCTGATAATCCTAAAGCCGGGGAACTGACAGAAATAGTTGATCCTGTTCATCTTAGAACCATTACTATGCCAGATAGTACCGACCTT GCTAACAAGGTTGTTTGTCTTCTTTACACAAATTCTGGAGCTGGCCTTCTGGCTCTTGGTACAAAAGGGATTCAGAAGCTGTGGAAATGGAACCGTAATG AATTGAATCCCAGCGGAAAGGCCTCGGCTAGTGCTATGCCCAGACATTGGCAACCAAGTAGTGGTCTTCTTATGACTAATGATGTCCCAGACAATTCTGA AGAAACAGTTCCCTGCATAGCACTCTCAAAGAATGATTCTTATGTCATGTCTGCCTGTGGAGGAAAAGTTTCATTGTTCAACATGATGACTTTTAAGGTA ATGGCAACTTTTATGTCACCTCCGCCATCTTCAACCATCCTCGCATTTCACCCTAAAGACAATAACATCATCGCTGTTGGAATGGAAGATGGAACTATTC AATTTTACAATGTTAGAGTGGATGAGGTCAAAAATAAACTGGAGGGCCACAATAAGCGCATTACTGGTTTAGCCTTTTCGAGTCACCTGAATATCTTGGT TTCATCCTGTGCTGATGGTCAGATTTGCTTCTGGAACATTGATTCATGGGATAAGAAAAAATCAGTATCAGTCCAAATGCGAGATGGAAAGGCACTTGTT GGTGATACTCGAGTGCAGTTCCATTCTGATCAAGTGCACTTACTGGTATGGCATGAATCACAGCTAGCAATATACGATGCTTCAAAAATAGAATTGGTTT GGCAGTGGGGTCCACAAGATGGATTGTCTGCTTCCATAACCTCTGCCACATATTCCTGCAATGGCCAACTAGTTTTTGCGGCTTTCGCTGATGGAAACAT TAGAGTATTTGATGCTGATGGCCTGAGACCCAAATGCCGTATAGCTTCGTCTGCATACCTACATCAGACATCATCAAACAGGTTTTTAGATTTCACTGTG TTTTAACCCTACTTGGTTTCTTATTATTAATATGCGATTGCAAACATCCCTATTAGATGACACTATATAATTGATGCTACTTTATGTTTTGCATTGCTGA ACTCCTGCATAAATTTTTTAGCTATATGATATTTCAAACAAGATTTTATACCAATTTCTTCAAGAATAATAATCATTAAGACATTAACCTTTATTTGTTT GTACAGTCAAAATGTATACCCCCTTGTTATTGCGGCGCATCCGCAGGATTCAAATCAATTTGGAGTTGGACTATCAGATGGTTCTGTTAAGGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_168657; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_483635
| Blastp | Topless-related protein 2 from Arabidopsis with 71.15% of identity |
|---|---|
| Blastx | Topless-related protein 2 from Arabidopsis with 71.15% of identity |
| Eggnog | CTLH(ENOG410YEX8) |
| Kegg | Link to kegg annotations (AT3G16830) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456283.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |