Ll_transcript_483551

• Id Trinity: TRINITY_DN49357_c7_g1_i6
• Name Transcript: Ll_transcript_483551
• Sequence: GATACAGTTCGGGGCAACAAATCCTTATCCATGTAGTCAAGGCAAATTGTGTCCAATTTTGGAAAGATTTTTTAAGTGCATCCTAAATATGTCATTATTT TAACAGCTAGTATGTTCCTTTCAATTAATGAGCTACCTGTTATAAAATATGATTAACATGAAAATGATTCAGGCTATTGATGTTGGTTGTGTTAGATGAT ATTTTGATTGATAGAATATTATCTTATTCATGTTTTAGTTAGTTTCGGTTTATTTGAATTTATTTATAGTTTATGTTGTTAGTTATTATTTGAGTCGTTA TTGTTTGCAACAGTTTTTGTTTTTATAATAAATTGTTTAGACTTACTCATACTTGAGTTGACCAATCTTGATCATCCTAAATTTCTACGGGTCGGATGTA GATCAACTATTTTAGATTGAAGAAAATGGATGTAATGGAGCCAAATGAAATGAAATGATACAAACTTACATTGTTTGGATTGTTTAAGATTTGATGGCAT GGGATGAAACCTGATTGGAATGATATGCAACCAACTAATTATTCACTCTATTCATTTCCTTGCATCACAATATATCCAAATAATGGTATAGTGATCTCGT TTCATTTCATTCCATTCCACTCATAATGAAATTTTCAAGGCAAGCATAGTCTAAATCTTATTGACTAACCACTTCATTGTATACTTGTATACTGCATTTT CCAATGAAGTTGTTTATTTGAAGGGTGAAAGCTTATCTTCTGCAAGGTTGCCACACAAATTCTACCCAATTATTAAAGCTACAGATGCTAAATTCGCTAG CGCAACAGCTGCAGACGCTGTTCTGTGCCAGAATGGAACACTGGATCCCGCCAAGGTGACCGGTAAAATTGTAGTATGCCTCCGAGGGATAACTGCAAGA GTCGACAAGGGAGAGCAAGCTCTGCTTGCTGGTGCTGTGGGAATGGTTCTTGCCAATGATAAGGCTAGTGGAAATGAAATTTTGGCTGATCCTCATGTCC TTGCTACATCTCATGTCAATTTCAGTAATGGTGTTACTGTCTTTAGTTACATCAACTCAACCAAGTTTCCAGTGGCTTATATAACACATCCAAAGACAAA ACTGAATACTAAGCCAGCCCCAGTAATGGCAGCATTCTCATCAAAAGGACCAAATACTATTATACCGGAGATCTTAAAGCCTGATATCACAGCACCAGGA GTGTCAGTTATAGCAGCCTACACTGAAGCTGAAGGGCCTACGAATCAGGAGTTTGACAAGCGCCGCATTCCATATAACTCAATCTCAGGCACATCAATGT CATGCCCTCACATTTCAGGTGTTGTTGGCCTCTTGAAAGCGCTATATCCATCATGGAGTCCGGCTGCAATTAAATCAGCAATCATGACAACTTCTACAAC ACTAGAAAACGACGCGGAGCCACTGCTGAATGCTACTGATGGTCAGGCTACACCATTCAGTTATGGTGCAGGACATGCTCAGCCAAACAGCGCAATGGAT CCCGGCCTTGTTTACGATTCAACAATCGAGGATTATCTGAACTTCTTATGTGCATTAGGCTACAATGAAACACAAATCTCAGTATTTTCACAAGGTCCTT ATAACTGCCAAAAGAAATTTAGTGTCCTCAACCTCAACTATCCTTCTATCACAGTCCCATATCTCTCAAGATCAGTAAAAGTTAAAAGGACATTAAAAAA TGTTGGCCCTCCAGCGACGTATATTGTTCATGTTCAAAACCCGAGCGGTATCGCGATTTCTGTGAAGCCGAGCATCTTGGAGTTCAAACATGTTGGTGAA GAGAAGAGCTTTAAAGTAACCTTGAAAGCTAAGAAAGTGAAAACAACAAATAACTATGTGTTTGGAAAGTTGACATGGTCAGATGGCAAGCATTATGTAA GGAGTCCAATTGTGGTGAAGGCACTCTAGCTAGAAATTGTTGCGACGAAGTCGTGACTCAGGCAATGATAATCTCCAGTGCTATAATTAATTGTTAGAAG CAGTTTCCAACAGAAACTAAGTAGTTATATGTGAATAAACTAAGTTACATTTCTAATTGATTAGTAGCATATTCCAAATGATATCAGTTGCTTCTGAATT TGTGCATTATGGAATTTCCTCTTATCAATGATTGGATAAGAGAAAAGGAATAAAATATTATTTAGCTGGCTTTCTTTCTGAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_168668;
• Additional information: details;

Expression of Ll_transcript_483551

FPKM

• PAB: 0.3
• PNAB: 1.5
• PS1: 2.4
• PS2: 0.5
• PS3: 0.8
• PW1: 0.4
• PW2: 1.1
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483551

• Blastp: Subtilisin-like protease SBT5.4 from Arabidopsis with 60.24% of identity
• Blastx: Subtilisin-like protease SBT5.3 from Arabidopsis with 60% of identity
• Eggnog: peptidase (S8 and S53, subtilisin, kexin, sedolisin(COG1404)
• Kegg: Link to kegg annotations (AT5G59810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461923.1)
• Pfam: Subtilase family (PF00082.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;