Ll_transcript_483319

• Id Trinity: TRINITY_DN49358_c0_g1_i14
• Name Transcript: Ll_transcript_483319
• Sequence: GGAAAGGAATATGGTATATGCCATTGGGTCGGATCCTGCAACTCTTTGTATGTAATTGTGTTCATAGGCGAATACAATAAATCAACAACATCTCAATTCT CAAACCTATCTCCACCGCCATTCACAATCTACGTTTCAATATACCAATACAATACAATACCATCCCAATACTTATACATTCTAACATTGTTTTTGGACAC GCCAAGCAAAGCTCAAAGTTTTTTCTGCCATGGGAGGTGGAAGCAGAAGAGGAAGATCAAGATCCAATAACAACAGAAACCGTAAAAATGCACTCTTTAT TGAAGGAGGATTCTTGTCTGATTGGCATCCATCTTCATCCCCCACTTTCAATTCATCAGGTGGAAATAGTAGCTCGAAGAAAAGGTCTGGTTCCAAATCT GGGAGGGGACGTAGAGCAGAAGCTTCTACTTCTAAAACAGTGCTTCCAAATTCTTCTTCAGGAGCTACTATTGGATATAGTTACCCTTCATATAATAATA TTCAGGAGGTCTCATGTGTTGAGAACAACAGTGAAGATAGTAATTTAAATAAGCGACAACATTTTGTTCCGGTGGATTCCAAGCAGAATCAAGTTATTGC TCATGCAGACCAAACACCTCCTTCAAAACCCAGCAATGTGCAATATAGTTATAGTTATGGCTCAGATTTTGTTTTGGGTGACAGCTCTCATAAAGGATTA GATTTCTCTCCCGAACATGACAATACCCCAAGTGGCATTGGCACATCCTCTGATCAGATGCCCCAATCAACTCCAGTTTTCGGTTCATCATCTTTTGTGA AGGATGTTGATTCTGATGAGGGTATGAACTGCGAGTTAGACAATCAGATGACTGAAGAGTTGCCACCAAAGATGTCTGCTGAGAGAAATTCTGGGTTTCT GTCAATTGGAGGCCTTAAATTATACACCGAGGACATCTCAGATAATGGAAGTGACGAAGATGATAATGAAATGTCATCAGATGAGGACATATATGGTTCT TCTGAGTCAGAAGAGTTAGTTGGATCATCTGAAAGCGATGATTCTGAGGACATATCTGACAGTGATTCAGACATTGATGAAGAGGTAGCTGAAGATTATC TGGAAGGTGTTGGGGGTAGTGGAAACATCATAGATGCACAATATTTGCTAAAATCTGTTTCGGATGAGTCAGATGATGATGGTTCTTCTAGCAGTTGCTA TGATGAGGCTTTGGAGAAGTTGAGTGGCATTGCCCTTCAAGAAGCCTCCAGGGAATACGGCATGAAGAAATCCCAACCATGGAAAAAACGTTCTGGACAT TCTGGGCCTTTGGATTTGGACGATCTAATGCTGGAAAAGGAACCAAGAACCGCTTCTAGGAAGAAGCATGTTTCCCAGTTTCCTCGCTCTTGGCCTTTGC AGGCTCAGAAGAGTAAAGCATCTAAAAGAATTCATGGTGAAAAGAAGAAACTCCGCAAGGAAAAAATTGCTGTCAAACGTAGAGAAAGAATGTTTCACCG TGGAGTTGATCTCGAGAAAATTAATTTGAAATTACAACAACTTGTTTTGGAGCAAGTGGATATATTCTCTTTCCAGCCTATGGATTCTCGGGATTGTTCA CAGGTACAACGAGTAGCAGCAATTTATAATTTTCGCAGTAGTTGCCAAAGTTTTGGGAAAAAAAGATTTGTGACAGTGATGCGGACACAATCGACATCCA TGCCATCTTCAAGTAGTAGACAGCGCCTGGAAAAGCTGCTGGGGGTTGATGATGAGGATGCTGATTTTGCCGTCACTGATTATATAAATAAGAAGCATGT GAGTGGAGACCGGAGATCAGCAAAGAGAAGTGCTAAAAGGAATGACTTTAGACTGCAAGAACCTCAATCTTCACAGAAGAAGACATCAAAGAACTCAGGC AGCGGCAAAGGGAAGGACAAGAAAGGAAGTGGACAAAAGGCTCCATTAGCTAATCAGCCTGTGTCATTTGTATCGAGTGGCTTAATCCATTCCGAAACTG TGCAGATCACCGCTGTTAATATTGAAGAGACTGATGATGCTGTTAAGAAAGGTGTTATCACTAGCTCTGCCAATATCGGTTCGTTTGAGTTACACACCAC TGGTTTTGGTTCAAAAATGCTGGCTAAAATGGGATACATGGAAGGAGCAGGGTTAGGAGTAAATGGTCAAGGTATGGCAGAACCCATTGAGGTTATAAGA AGGCCTAAATCACTTGG
• Tissue: pods
• Gene name: LI_gene_168672;
• Additional information: details;

Expression of Ll_transcript_483319

FPKM

• PAB: 5.3
• PNAB: 11.2
• PS1: 17.2
• PS2: 13.2
• PS3: 15.5
• PW1: 10
• PW2: 9.2
• PW3: 8.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483319

• Blastp: Zinc finger CCCH-type with G patch domain-containing protein from Nematostella with 46.15% of identity
• Blastx: Zinc finger CCCH-type with G patch domain-containing protein from Nematostella with 46.15% of identity
• Eggnog: Zinc finger CCCH-type with G patch(ENOG410Z4ZI)
• Kegg: Link to kegg annotations (NEMVE_v1g244155)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453188.1)
• Pfam: R3H domain (PF01424.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;