Ll_transcript_483327

• Id Trinity: TRINITY_DN49358_c0_g1_i22
• Name Transcript: Ll_transcript_483327
• Sequence: TTATAATCTGACACATTAGTTAAAAAATTAAACATTATTGATTTTATCTATTTTTATTCATTTTGATGTTATATTTTATTATACATGTGGCTAACGTTGG AGCCAATTCCAGAACAGAAGTGGAATTTAGCTATAATTAATTTAATTTATGATTAAGAGCTTCTTGCTTATTGTTGAGAAAGTAAAGAAGATTGGTTTGA AATAGTTTTCCTAGGATATTCTCTGGGAGAGATACACGTTAAGTTGGAATGAAGGAAAATGCATTGCTTACAGACAAAGCATAACAAGTATTTTTTTCCC ATAATTTAACAACAACTTTCACCTACAGAGAAAGATGGCTTCATGGAACTAGGGAGCAAGAAGCATATTTATATGAAGAGAATGGAATAACTTGGGCTTG TGAAAACAAAACATTTCTATTTCCACACTCAAAATCACCCACCAGACAAGAAACCAAGAAAATTGTGGCACGTTTGGTTAAATTTGTTATAACCAGAACC AACATATAGTTACATTAATTGTGGTAATAAAAAAATGAATTTTTTTTCATCACATTAATCCTTAATCTATTTTAATTGGTCATGAATTTTATCTAAGATT TGGTTTAAGAAAAATAGGGCAAGCCTCTTCGCTGAATGAATAAAGTTTTTCTATTTTTATAGAAATAGTAGTTAAATCATGTTACAACTAGTTCAGTTTG TAGGATTGAACTGAGCCTAAGAATATGGTATATGCTATCGGGTCGGGGGAATATGCTATTGGATCGGGTTAATGTTGGAGGGTGAATCTTACATTTTACA TTCTTTGTATCCATAGATGAACAATACAAAACGTTACATACTAATACTGCAATTGTAGTAAGGTTTTTCATCCATGGGAGGTGGAAACAGAGGAGGAAGA TCGAGATCCAGCAACAACAGAAACCGTAAAAATGCAATCTTTGTTGAAGGGGGTTTCTTATCTGATTGCCATTTATCCTCGTCCCCCACTTTCAATTCAC CAGGTGGAAACTGTAGCTCGAAGAAAGGGTCGGGTTCCAAATCTGGGAGGGTACATAGAGCAGAAACTTCTGCTTCTAAAACAGTGATTGTTCCAAACTC TTATTTGGGGACTACTATTGGGTATAATTACCCTTCAGCAAATAATATTCAGGATGACTCATGTTTTGGGAACAACAGTGAAGATAGTAATTTAAATAAG CTACAACATTTTGCTTTGGTGGATTCCAAGCAGAAGAATCAAGTTATTGCTCATGTAGACCAAACACCTCCTTCAAAATCCAACAAAGTGGAATATACTT ATGCTTATGGCTCAGATTTTGTTTTGGGTGACAGCTCTCATAGAGGATTAGGTTTCCATTCTGAACATGATAAAACTCCAAGTGGCATTGGCACATCGTC CGATCAATTGCCCCAATCAACTGCAGTTTTAGATTCTTCGTCTGTTGAGAAGGATGTTGGTTCTGATGAGGGTATGGGCGGTGAGTTAAGCAATCAGATG ACTGAAGGGTTGCCGTCAAAGATGTCTGCTGAGAGAAATCCAGGGTTTCTGTCAATTGGAGGGCTTAAACTATACACCGAGGACATCTCAGATAATGAAA GTGATCAACATGATGATGAAATGTCATCGAACGAGGATGGATCTGGTTCTTCTGAATCAGAAGAATTGGTTGGATCATCTGAAAGTGATGACTCTGAGGA CACATCTGACAGTGATTCTGACATTGATGAAGATGTAGCTGAAGATTATTTGGAAGGAGTTGGTGGTAGTGATAACATCATAGATGCAAAATGGTTGCTA AAACCTGATTTGGACGAGTCTGATGATGATGATTCTCCTAGAAGTTGCTATGACAAGACTTTGGAGAAGTTGAGTGGCATTTCCCTTCAAGAAGCCTCTA GGGAATATGGCAAGAAGAAATCCCGATCATCGAAAAAACGGTCTGGACATTCTGGGCCTTTAGCTTTGGATGATCTAATGCTGGAAAAAGATCCAAGAAC TTATTCTGCTAGAAAGAAGCATGTTCCTCAGTTCCCTCGCTCTTGGCCTTTGCAGGATCAAAAGATTGAAGCTTCCATAAGAATTCATGGTGAAAAAAAG AAAGTTCGTAAAGAAAAGATTGCTGTCAAACGTAGAGAAAGAATGTTTCACCGTGGAGTTGATCTCGAGAAAATTAACTTGAAATTAGAGCAGATTGTTT TGGAGAAAGTGGATATATTTTCTTTTCAGCCTATGCATTCTCGGGATTGTTCACAGGTACAGCGAGTAGCAGCACTTTATAATTTACGCAGTAGTTGCCA AAGCTTTGGGAAAAAAAGATTTGTGACAGTGATGCGAACACAATTCACATCAATGCCATCTTCAAGTGGTAGACAGCGACTGTCAAAGGTTCTGTAGTTT CACACTTGTACTAATTATATCTTGACTTTTATTTATGCATTACATATTGTTTATGTTTTTACTTTTTTCGTTGTCTGAGTGAACATATGAGACAAGGTCT ATTTAGGAATTAATGCATTAGAGAGTATGTAAGGATAGCACCTGGTATGGAAAAGATGGTAGAAATTCGTCTTTACGTGATTTAGCAATGGAGGAGAAAC CCACTTGAGTCCATAGAAATAAGAGTAGATCATAAAGGTTATGGAATCTACAGAAAAGCTACTGGTGAAACCATTAAAAAAGGAATAGGACTAATGGCCT TTCCAAAAACACGATTTACGATAGAATCCTTTTATCCGACCCAGCCTAGTGGGAAAAGATTTTGTTGACATATATTGAGAAGTAGCATTTATGTTTTCCT CTTGTTTCCATCCTTCTATGAGATACAGATTGACATCTTGCTCTGATCCCCTCGTCAACTCTCCTAGGCCAATGCAATTGGAAGTTGAAAGATGGAAATC TTAATTAGAAGCTTCTGGTGTTTCGATGACTGGCGATTTCTTTCAAAGTTTAGACGTTTTTAGCCATGCATTACGTACATGTTTACATATTTGCAGTTAT TTGTAAGTTGTTAGTTATAGTTGAGTCTAATTGTTATATGAATTTCAGCTTATGGGAGTTGATGATGAGAGTGTTGATTTTGCCATCACCGGCTATATAA ATAAGAAGCCTGTGACTGGAGACAGGAGTTCAGCAAAGAAAAGTGCTAAAAGGAATGACTTCAGAATGCAAGAACCTCAATCAGCACAGAACAAGACATC AAAGTACTCAAAGAGCCGAGGCAGCGGTAAAGGGATGGACAAGAAAGGAAGTGGACAAAAGGGTCCATTAGCTAATCAACCTGTCTCATTTGTATCAAGT GGCTTAATTCATTCAGAAACTGTGCAGATCACAGCTGTTGATACTGAAGAGAGTGATAGCCCTTATAAGAAGAGTGTCACTAGCTCTGCCAATATCGGTT CGTTCGAGGTACACACCACTGGTTTTGGTTCAAAAATGTTGGCTAGAATGGGATACATGGAAGGAGCAGGGTTAGGGAAAAATGGCCAAGGTATGGCAGA ACCCATTGAGGTTATAAGAAGGCCTAAATCACTTGGTTTGGGTGTGGAATTCTCCACCAGTCCTCCTGAGCCAGCTTCTGAACCAGTTAGTAGGAACAGC AAGTCTTCAAGTTCAAGAATTGGTGGTTTTGAAAAACATACCAAAGGTTTTGGATCAAAGATGATGGCGAAGATGGGATTTATTGAAGGGACTGGATTAG GCAGAGACTCACAAGGCATCACGAATCCATTAAGCGCGGTTAGGCTACCAAAGTCGCGAGGATTAGGTCCGAAGCGTTAATTTAGGTGTCATTTGCGTTT GGTTTCCTAATGTACATTAGTCTCTAATGATTCTCCAATCTGGTTTAGTTTTAATGTAGCATGATGACTGTATTTGCGTATGTAGCATCACTTTTAAAAT GCTATATTTGCTGTCTCTAAACGAAAGAAAGAAACCAAGTTCTATGGAAGACATGTTATGTAATTATGTTGAAGACAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_168672;
• Additional information: details;

Expression of Ll_transcript_483327

FPKM

• PAB: 1.5
• PNAB: 2.2
• PS1: 2.8
• PS2: 2
• PS3: 2.4
• PW1: 2.2
• PW2: 1.6
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483327

• Blastp: -
• Blastx: G-patch domain-containing protein C1486.03 from Schizosaccharomyces with 41.24% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463089.1)
• Pfam: R3H domain (PF01424.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;