| Id Trinity | TRINITY_DN49358_c0_g1_i23 |
|---|---|
| Name Transcript | Ll_transcript_483328 |
| Sequence | GGAAAGGAATATGGTATATGCCATTGGGTCGGATCCTGCAACTCTTTGTATGTAATTGTGTTCATAGGCGAATACAATAAATCAACAACATCTCAATTCT CAAACCTATCTCCACCGCCATTCACAATCTACGTTTCAATATACCAATACAATACAATACCATCCCAATACTTATACATTCTAACATTGTTTTTGGACAC GCCAAGCAAAGCTCAAAGTTTTTTCTGCCATGGGAGGTGGAAGCAGAAGAGGAAGATCAAGATCCAATAACAACAGAAACCGTAAAAATGCACTCTTTAT TGAAGGAGGATTCTTGTCTGATTGGCATCCATCTTCATCCCCCACTTTCAATTCATCAGGTACCCATTTTCTTTCCTCACCAAAAAAATTGATCTTGATT AAAATTTTACCTCTTTGATTCATTTTTATTGCAAAAATATGATCTTTGGGAGATTTTGGTTGATGGGTGTTTCATGTTTTTGGGGATTTTTATTTTTCAA TATGGCTCCTTCGATGCTTTGTTTTGGATATTCTTTTGCATTTGTATTGCAGGTGGAAATAGTAGCTCGAAGAAAAGGTCTGGTTCCAAATCTGGGAGGG GACGTAGAGCAGAAGCTTCTACTTCTAAAACAGTGCTTCCAAATTCTTCTTCAGGAGCTACTATTGGATATAGTTACCCTTCATATAATAATATTCAGGA GGTCTCATGTGTTGAGAACAACAGTGAAGATAGTAATTTAAATAAGCGACAACATTTTGTTCCGGTGGATTCCAAGCAGAATCAAGTTATTGCTCATGCA GACCAAACACCTCCTTCAAAACCCAGCAATGTGCAATATAGTTATAGTTATGGCTCAGATTTTGTTTTGGGTGACAGCTCTCATAAAGGATTAGATTTCT CTCCCGAACATGACAATACCCCAAGTGGCATTGGCACATCCTCTGATCAGATGCCCCAATCAACTCCAGTTTTCGGTTCATCATCTTTTGTGAAGGATGT TGATTCTGATGAGGGTATGAACTGCGAGTTAGACAATCAGATGACTGAAGAGTTGCCACCAAAGATGTCTGCTGAGAGAAATTCTGGGTTTCTGTCAATT GGAGGCCTTAAATTATACACCGAGGACATCTCAGATAATGGAAGTGACGAAGATGATAATGAAATGTCATCAGATGAGGACATATATGGTTCTTCTGAGT CAGAAGAGTTAGTTGGATCATCTGAAAGCGATGATTCTGAGGACATATCTGACAGTGATTCAGACATTGATGAAGAGGTAGCTGAAGATTATCTGGAAGG TGTTGGGGGTAGTGGAAACATCATAGATGCACAATATTTGCTAAAATCTGTTTCGGATGAGTCAGATGATGATGGTTCTTCTAGCAGTTGCTATGATGAG GCTTTGGAGAAGTTGAGTGGCATTGCCCTTCAAGAAGCCTCCAGGGAATACGGCATGAAGAAATCCCAACCATGGAAAAAACGTTCTGGACATTCTGGGC CTTTGGATTTGGACGATCTAATGCTGGAAAAGGAACCAAGAACCGCTTCTAGGAAGAAGCATGTTTCCCAGTTTCCTCGCTCTTGGCCTTTGCAGGCTCA GAAGAGTAAAGCATCTAAAAGAATTCATGGTACCTCTATCCCCACCTATGTCAAATATCCACTGTTGTTCTCTTCTTTTCATTTTAACAAATTTTGGTGG CTCCTCTAATTTACATTATACATTTTGAACCTCGAAAGCATTCAGTTTCCTTGTCAAAGTGATGTTTCATGAATTTCAATTCATTAGTATCATTACTTAT CTTTACTGTTTCAATATTTTTTGTGGGAGGTTGGCAAATAACTAGCCGTGAAGCAGTTGTTTAATGTGTGTATGTTTTCATCTTTGAGCCTAGTGCCCAG AGTTATAGAATTTTATGAATATTATTGCATTTTTATAAATAGAATATCAAAGTTGATGGAAAATGTTTCAAGTTTATGGGTATTTAACATCTATGAACTT TAATACCGAAAATGGTAGAACTTATAGTGGGAAAATTATAGATGTCAAAGAAAAGGATAAGCAGTCATGTATTGCCATGTGGGAGAAAATAAATGCAATT ATTTAAACTCTCAGTTTGGTGAGATATTATGCAGTTCCAGACTTCCAGCCACTTCATTCTCTTGAGGCTTGTTTTATACAGGTGAAAAGAAGAAACTCCG CAAGGAAAAAATTGCTGTCAAACGTAGAGAAAGAATGTTTCACCGTGGAGTTGATCTCGAGAAAATTAATTTGGTATGGGATAAAATTTAAATTTTTTTC CATCTACAATGATATATACATCACTTATGTCTGACCACACTATTTCCAGGATAGTTTTTTATTGTTTTACCTTCTCTCTTTATCTCTCTCACATTAATTA CAATTACACACACATATATATGTTTGTGCGACTAGGCCAGATTTAGTTATAATTGGTCACTTTTTTGTAATTTTCTCATTTTAATATTTGGTGTTTTTTC CACTACATCTGGTGACCCTTCAAGCCCTTTCCTTTCTAATCATGTAAAAATTCTAAAACTGAATGGGAGGTCTCTTGTTGATCATATTTAGCGTAAAAAA ATTATGTGCTAAAAGATTTGCTAACTCCTTTATATTGGAACTATCGTATATCTCCGACATCGTTGCTTCATGTCATAGAGATTCGATAAAAGTTTTACGT TGGCCATCAAATGCCTAATGCAACTTGCACCTTTTTATCCGGGCTTAGGATTGACTATAGCATCAAGCACACAAGCAGGTTTTGAATAAATTTGCACCTT AGGTTGTTTGGACATGTGTGGTAGATACCGTTAGAAACACCATTAAGATGTATGCTAAATCACATATTTCTTGTAATTGCATATTTTCATAGTTAACCAT GTTGGACTTAGAATAGGACATTTTGAATTCAAATTGTTCTTGGCATTTATATCTCTTTCTGACAGTCCTCTTGTTCTCATTATTTTATTTTGTAGAAATT ACAACAACTTGTTTTGGAGCAAGTGGATATATTCTCTTTCCAGCCTATGGATTCTCGGGATTGTTCACAGGTACAACGAGTAGCAGCAATTTATAATTTT CGCAGTAGTTGCCAAAGTTTTGGGAAAAAAAGATTTGTGACAGTGATGCGGACACAATCGACATCCATGCCATCTTCAAGTAGTAGACAGCGCCTGGAAA AGCTGCTGGGGGTTGATGATGAGGATGCTGATTTTGCCGTCACTGATTATATAAATAAGAAGCATGTGAGTGGAGACCGGAGATCAGCAAAGAGAAGTGC TAAAAGGAATGACTTTAGACTGCAAGAACCTCAATCTTCACAGAAGAAGACATCAAAGAACTCAGGCAGCGGCAAAGGGAAGGACAAGAAAGGAAGTGGA CAAAAGGCTCCATTAGCTAATCAGCCTGTGTCATTTGTATCGAGTGGCTTAATCCATTCCGAAACTGTGCAGATCACCGCTGTTAATATTGAAGAGACTG ATGATGCTGTTAAGAAAGGTGTTATCACTAGCTCTGCCAATATCGGTTCGTTTGAGTTACACACCACTGGTTTTGGTTCAAAAATGCTGGCTAAAATGGG ATACATGGAAGGAGCAGGGTTAGGAGTAAATGGTCAAGGTATGGCAGAACCCATTGAGGTTATAAGAAGGCCTAAATCACTTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_168672; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_483328
| Blastp | - |
|---|---|
| Blastx | Zinc finger CCCH-type with G patch domain-containing protein from Nematostella with 46.15% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453188.1) |
| Pfam | - |
| Rfam | - |
| GO | - |