Ll_transcript_483314

• Id Trinity: TRINITY_DN49358_c0_g1_i9
• Name Transcript: Ll_transcript_483314
• Sequence: TTATAATCTGACACATTAGTTAAAAAATTAAACATTATTGATTTTATCTATTTTTATTCATTTTGATGTTATATTTTATTATACATGTGGCTAACGTTGG AGCCAATTCCAGAACAGAAGTGGAATTTAGCTATAATTAATTTAATTTATGATTAAGAGCTTCTTGCTTATTGTTGAGAAAGTAAAGAAGATTGGTTTGA AATAGTTTTCCTAGGATATTCTCTGGGAGAGATACACGTTAAGTTGGAATGAAGGAAAATGCATTGCTTACAGACAAAGCATAACAAGTATTTTTTTCCC ATAATTTAACAACAACTTTCACCTACAGAGAAAGATGGCTTCATGGAACTAGGGAGCAAGAAGCATATTTATATGAAGAGAATGGAATAACTTGGGCTTG TGAAAACAAAACATTTCTATTTCCACACTCAAAATCACCCACCAGACAAGAAACCAAGAAAATTGTGGCACGTTTGGTTAAATTTGTTATAACCAGAACC AACATATAGTTACATTAATTGTGTAAGGTTTTTCATCCATGGGAGGTGGAAACAGAGGAGGAAGATCGAGATCCAGCAACAACAGAAACCGTAAAAATGC AATCTTTGTTGAAGGGGGTTTCTTATCTGATTGCCATTTATCCTCGTCCCCCACTTTCAATTCACCAGGTGGAAACTGTAGCTCGAAGAAAGGGTCGGGT TCCAAATCTGGGAGGGTACATAGAGCAGAAACTTCTGCTTCTAAAACAGTGATTGTTCCAAACTCTTATTTGGGGACTACTATTGGGTATAATTACCCTT CAGCAAATAATATTCAGGATGACTCATGTTTTGGGAACAACAGTGAAGATAGTAATTTAAATAAGCTACAACATTTTGCTTTGGTGGATTCCAAGCAGAA GAATCAAGTTATTGCTCATGTAGACCAAACACCTCCTTCAAAATCCAACAAAGTGGAATATACTTATGCTTATGGCTCAGATTTTGTTTTGGGTGACAGC TCTCATAGAGGATTAGGTTTCCATTCTGAACATGATAAAACTCCAAGTGGCATTGGCACATCGTCCGATCAATTGCCCCAATCAACTGCAGTTTTAGATT CTTCGTCTGTTGAGAAGGATGTTGGTTCTGATGAGGGTATGGGCGGTGAGTTAAGCAATCAGATGACTGAAGGGTTGCCGTCAAAGATGTCTGCTGAGAG AAATCCAGGGTTTCTGTCAATTGGAGGGCTTAAACTATACACCGAGGACATCTCAGATAATGAAAGTGATCAACATGATGATGAAATGTCATCGAACGAG GATGGATCTGGTTCTTCTGAATCAGAAGAATTGGTTGGATCATCTGAAAGTGATGACTCTGAGGACACATCTGACAGTGATTCTGACATTGATGAAGATG TAGCTGAAGATTATTTGGAAGGAGTTGGTGGTAGTGATAACATCATAGATGCAAAATGGTTGCTAAAACCTGATTTGGACGAGTCTGATGATGATGATTC TCCTAGAAGTTGCTATGACAAGACTTTGGAGAAGTTGAGTGGCATTTCCCTTCAAGAAGCCTCTAGGGAATATGGCAAGAAGAAATCCCGATCATCGAAA AAACGGTCTGGACATTCTGGGCCTTTAGCTTTGGATGATCTAATGCTGGAAAAAGATCCAAGAACTTATTCTGCTAGAAAGAAGCATGTTCCTCAGTTCC CTCGCTCTTGGCCTTTGCAGGATCAAAAGATTGAAGCTTCCATAAGAATTCATGGTGAAAAAAAGAAAGTTCGTAAAGAAAAGATTGCTGTCAAACGTAG AGAAAGAATGTTTCACCGTGGAGTTGATCTCGAGAAAATTAACTTGAAATTAGAGCAGATTGTTTTGGAGAAAGTGGATATATTTTCTTTTCAGCCTATG CATTCTCGGGATTGTTCACAGGTACAGCGAGTAGCAGCACTTTATAATTTACGCAGTAGTTGCCAAAGCTTTGGGAAAAAAAGATTTGTGACAGTGATGC GAACACAATTCACATCAATGCCATCTTCAAGTGGTAGACAGCGACTGTCAAAGGTTCTGTAGTTTCACACTTGTACTAATTATATCTTGACTTTTATTTA TGCATTACATATTGTTTATGTTTTTACTTTTTTCGTTGTCTGAGTGAACATATGAGACAAGGTCTATTTAGGAATTAATGCATTAGAGAGTATGTAAGGA TAGCACCTGGTATGGAAAAGATGGTAGAAATTCGTCTTTACGTGATTTAGCAATGGAGGAGAAACCCACTTGAGTCCATAGAAATAAGAGTAGATCATAA AGGTTATGGAATCTACAGAAAAGCTACTGGTGAAACCATTAAAAAAGGAATAGGACTAATGGCCTTTCCAAAAACACGATTTACGATAGAATCCTTTTAT CCGACCCAGCCTAGTGGGAAAAGATTTTGTTGACATATATTGAGAAGTAGCATTTATGTTTTCCTCTTGTTTCCATCCTTCTATGAGATACAGATTGACA TCTTGCTCTGATCCCCTCGTCAACTCTCCTAGGCCAATGCAATTGGAAGTTGAAAGATGGAAATCTTAATTAGAAGCTTCTGGTGTTTCGATGACTGGCG ATTTCTTTCAAAGTTTAGACGTTTTTAGCCATGCATTACGTACATGTTTACATATTTGCAGTTATTTGTAAGTTGTTAGTTATAGTTGAGTCTAATTGTT ATATGAATTTCAGCTTATGGGAGTTGATGATGAGAGTGTTGATTTTGCCATCACCGGCTATATAAATAAGAAGCCTGTGACTGGAGACAGGAGTTCAGCA AAGAAAAGTGCTAAAAGGAATGACTTCAGAATGCAAGAACCTCAATCAGCACAGAACAAGACATCAAAGTACTCAAAGAGCCGAGGCAGCGGTAAAGGGA TGGACAAGAAAGGAAGTGGACAAAAGGGTCCATTAGCTAATCAACCTGTCTCATTTGTATCAAGTGGCTTAATTCATTCAGAAACTGTGCAGATCACAGC TGTTGATACTGAAGAGAGTGATAGCCCTTATAAGAAGAGTGTCACTAGCTCTGCCAATATCGGTTCGTTCGAGGTACACACCACTGGTTTTGGTTCAAAA ATGTTGGCTAGAATGGGATACATGGAAGGAGCAGGGTTAGGGAAAAATGGCCAAGGTATGGCAGAACCCATTGAGGTTATAAGAAGGCCTAAATCACTTG GTTTGGGTGTGGAATTCTCCAACACCCCTCCTGAGCCAGCTTCTGAGCCAGCTAGTAGGAACAACTACAAGTCTTCAAGTTCAAGAATTGGTGCTTTTGA AAAACATACCAAAGGCTTTGGATCAAAGATGATGGCAAAAATGGGTTTTATTGAAGGCACAGGATTAGGTAGAGACTCACAAGGCATTACTGATCCATTA AGTGCTGTTAAGCTACCAAAGTCACGAGGACTAGGTGCCAAACGTTAATTTATGTCATCTGCTTTCTGTTCATAATGTATATTAACTTCAAATAAATCTA ATGATTCTCCTTCCTAGTTTAGTTTTATGGTATCATGACTGTGTAACTGTATTTGTTTATCATTTTCAATGGTAAGAAAAGAAAGTTCAGAAGATTCCTT GTATATGGTTAATTAATTATTTAAATCCAGTGATGTAATACTTTATATACGCCG
• Tissue: pods
• Gene name: LI_gene_168672;
• Additional information: details;

Expression of Ll_transcript_483314

FPKM

• PAB: 2.8
• PNAB: 3.7
• PS1: 4
• PS2: 2.3
• PS3: 3.5
• PW1: 6.7
• PW2: 5
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483314

• Blastp: -
• Blastx: Zinc finger CCCH-type with G patch domain-containing protein from Drosophila with 55.56% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463089.1)
• Pfam: R3H domain (PF01424.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;