Ll_transcript_484436

• Id Trinity: TRINITY_DN49359_c0_g1_i6
• Name Transcript: Ll_transcript_484436
• Sequence: GTCACCTTCCTCGTACTGCTTCAACATTCCAACGCTCAACTCTTACACATCAACTATCTACATAATTTAATGTCTATTTCCAACTTTACCCTCCCCATTT CCACAAAATTCCACCTTTGCCACACACAACAACACATGTATATAAATGCATGCTATGTTATATTCATATCATTTTTGTGTACATAATTATTATATAACAC TAGCAACTTTTAAAACATTTGGCTTTTATATTTTGGGAGAGTACTAAGCAATGGAGGAATCAAACGTTGTGAATGGTGCAGCCGAGGAACGTAGCGGGAG TTACACACCCAACAAGGAAAATATTACAACACAGCAAGCATCTCCGAGGAGTACACTGAGTCCAAGAAGCATTCAGAGTAGCGACTCTATTGATTTGGCC ATTGATGGTATTGTGGATACATCTATTGAGCAACTGTATCACAATGTGTGTGAAATGAGAAGCTCTGATCAATCACCTTCGAGGACTAGTTTCTACTCAT ATGGTGAAGAGTCCTCAAGGATTGACTCAGAATTGTGTCATCTAGTTGAAGATGTCGTAGATTTCGAGATCACAAAGGAGGTAGTCACTGAGAATAAAGA AGGGTCAAATCCTGAGAAAGATGCTGTGTCATGTGGCAATGACCCTACACAGAAGGGTTATATTCCAAGGAGGGTTGTTGAAGGATCAGTGAAGTCAACT CCAAAAGGAAGAAATTCATCAACTTACAAGAGGAGGAATGAGAAGGCTATAAGAAAAGCAAATGGTGTTTATAATATGAGGAAGCATAATAGTAAACTTG GTTTGAAGGGGATTGAGGAAAGTGATGCTTACTTGGGTCCATATTTACTCAAGCAAACAAGAGACATGATCTCTTCAGGTGAGAATCCACATAAAGCACT TGCTTTGGGTCTTAGAGCTTTGCAATCATTTGAGATGGTAAGTGAAAATAATGGAAAACCAAGTTTAGAAATGGTCATGTGTCTGCATGTATTGGCAGCA ATATACTTCAATTTAGGACAATATAATGAGGCGATTCAGGTTCTTGAGCGTTCGATCGATATTCCTGTGTTAGAGGATGGCCAAGATCATGCATTAGCCA AGTTTGCAGATTGCATGCAACTGGATAATACTTATGCAATGATGGGCCAGATTGAGAATTCTATACTGTTTAACTTAGCAGGCCTTGAAATTCAAGGACA AGCCTTGGGAGAAACTGACCCGAGATTTGGTGAGATGTGTCGATATGTGGCTGAGGCACATGTTCAGGCCCTGCAGTTCAATGAGGCTGAGAAGCTTTGT CAGAGGGCTTTTGATATTCACAGGGAAACCGTCTCCTGCTTCGCTTGAAGAAGCAGCAGATAGGAGATTAATGGGGCTTATCTGTGACTCAGGGTGATTA TGAAGCTGCTCTTGAGCATTATGTTTTAGCAAGCATGGCAACAGCAGCAAATGGACAAGAAATTGATGTAGCCATGGTCAATTGTAGCATCGGTGACACA TATCTTTCATTGGCGCGGTATGATGAGGCAGTATTTTCTTACCAGAAAGCACTTACTGTGTTCAAATCAACAAAAGGAGAGAAACATCCAAGTGCGAAAG TTCAAGGAATTAAAATCTTACTGCGAAAGTTCGTTAAGAATTTTTAGTAAGATCAACCCTGGGATCCCCTTAGAAGAGGTTGCAAGTGGTTTAATAGATG TGACTGCAATCTATCAATAAATGACAGAGGATTGAAGTTGCTAAAGAAAGCCTTGAAGATATATGGTAATGCACCTGGTCAACAAAGTACTATTGCAGGA ATTGAAGCTCAAATGGGGGTTATGTATTATATGCTAGGGAACTACTCTGATTCTTACAACATCTTCAAAAGCACCATTGCAAAGTTTCGCACTAGCAGAG AGAAGAAATCAGCTTTGTTTGGGATTGCTTTGAACCCGATGGGACTCACATGCGTGCAGCGTTATGCTATAAATGAGGCAGCAGAATTGTTCGAAGAGGC CTGGACCATATTGGAAAAAGAATATGGTCCACATCACTCAGACACCTTAGGGGTATAAGTATAACAACTTTTTGTTTACAAATTGTGATGTTTTAACTTT TAATCAGTGAATTGCAAACTTCACCATGATATCTTGCCGTTCTCTCTTTTTGTCTCATACATTATTAAGGTTTTAATGAAAATAAATCTCTTACTGGTCT ATACATATTTTGCTTCTCTATTTATGAGTTGAAGATTGCATGCACGATCTCATCTTGCTAATTTATTGTCAAGCTTAACGCAGCCTTAAGCCTCAGTGTT TCCGATAAACCAAGAATTGATTGATATTTTTGCTTGTAGGCTTCATTTTCATCTTACCTGAATAGATGATATGATTTCTATAACTTTAAAATACATGTAG CCCAGTTCTTAATGCTTCAGCTAATAGAAAAACACAAAGGCACTGAGGTGGTAAAGTATAGTGCCATGTAATATATTCTTCTCATCGATGTTACTTGATG GTTGACTTTTGATGATAGAAGAAAAGGATTTGTAGACCTAAGGTAGTAAGGTGCTTAAACATTAGGTCATGGGAACCATTTTCTCCGATGGTGCTTAAAC CGTGATCGTCACTTGCTTTCGGTGTGATCACTGTGATGATTTATTTACTTTATGGCTATATTTATTGTCAGTAGTATCATTAATTCAAAATTTTCATTTC CTTCTATTCACTGGCCTTTTTCCTATGGATTTTTGGAAGTCATACTCTGTGTGCTTTAATAGCATCTCTTTGGCACTTCTGTGACTGAGTTTTGTACTGA AAAGACTTATTTGAAAAGGAATTTGTCTGAATCCTAGATGATGCTAGTTTAATCCAGTTTATGGACAAGGGGATAAGTGTGCCAATGGGAATCGTTAATT GCAATCGGCACCACTATATTGAATAAGCTACATGTGCCTATAATGGAGGCTAATTAATAAGGCCACACTGGAAGCTTTCTTCAATTCTCTCTACTAGTAA CCCTCTAATAACTATTTCAGAGCCATATCTTTCCAGGTTGCTTTTACTTTTTCTTTTGTAGTATTTAGTTTGTTTTTCTTGGTTCTGGCCAAGAATATCA TATCTTGGTTTATCTTTTTTCCTTGTATGTCTGCAAACCTAACTCCACTTTGTCTTCTATACCATACAGATTTTTTTGGCCTCTTCCCCTAACAACTGCA GTATGTATATCAGGAAACTTGTTAGAGATTTGGTCTAATTCTTGTTAAATGTTAATTTCATCATTCTTAATATTATAATTCCATTTAAAATTTGCCTGAC AATAGCACTTTTAAAATATAACAAATTAATCTCTTTTTGATGCATGTATTTATTAATTACATCTTAGTGATTAGGTATGTTAAGACTGAAAGGATGTATT TATTAGAGCGTCATCTAAGATTCTGCAAAGATTTTGTCGTTTACCTCCTTTGGACACACACGGTGGGGTATATTGAGTGATGCTAAATCGGCTTTGTTTG AAAGCCATAAAAATTATGTTGATGACTTAAGTTGAAGGATAGCATTTTTTGGTAGATAAGTTGTTGTATTGCCTTGTTACCAATTTTTTCTTGTCAATGT TGCTGTTGGAATCTAGTCCTAATGGAGTTATATACTGGTCTAGTTTGGTGCTTACCTTTTTTGGTTCTTGGATATTGAATTAGGTGTGTTCTTCTTGGTG TAAGCTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGTTGTAGAAGCAGGCAAACATCTAGATCCTGTCAAGGTGGTGGCACAGGTCCTGATGTA TCCATTTTTTGTTGGAAGTGTGCCCACCCGTTCTGAAATAAAGTTGTCAAACTCTTATTTTTATGACAAGGCTATGTGTATGCTAGCTTGGAAACTTTTC CTACCGGAGGAAGAATTTAACCTGGACCACCCAGCTGCCAATCCCCTAGTCCCAGGCCGGGGTCCTCCATTAAAGTTGATGCCTCCAACAATGACAATTG TGGCAGAACATGACTGGATGAGGGACCGTGCCATTGCTTACTCGGAGGAGCTCCGGAAAGTGAATGTCGATGCACCTGTTCTTGAGTACAAGGATGCAGT TCATGAATTCGCAACACTTGACATACTTCTGAAAACCCCTCAGGCTCAGGTCTGTGCTGAGGACATTGCCATTTGGGTCAAGAAATATATCTCACTCCGA GGTCACGAATTCTCGTATTGAGTAGGATATGCCAGATTGAGAGGATTACTAGTCATAGAATCTTTTTCCTCTCTTTGAAATTAGCTTCAGATCACTTTTC AACTATCAATTGACTTGGGGATGTTTGATATTTCCTACTTTTGTTATGATGCCTGATAAGGTCCTGGTTGTTGATCGATTCCACCTCTACCGGTCGGTTC TTTTTGTAAGATAGATTTGCTTGAGAGGGAGATAGTTGAGGCAGTTATATGCATTTACCTCATGCAGACCACTTTTTGAATCCCTTTGTTCCATTTTTTT CCTGTGTATTATGATGTACTATTTAAGATATATAAAATTTAGTGCACTGTTCTTTTAGCTAAGTGCCACTATGCAGTCTCCAATGCATTATCCTATCTCA AGCCCCATGGAGAGTAATGAGAGCATAGTTACTAGATACAACTTCTTTTTTCATTCATAATTATCCTCTCAACACCATTTGTTGAAGGACTCTTGCATAG AATTTGACTCCTCAATATTGTTGAAGGACTCTTGCATTGTCACCTTCAACCATTTGCACTAGGAAGCTTTCAACAATGAATATAAAATAAATGTTCATTG ATTTGTTAGTACAAAC
• Tissue: pods
• Gene name: LI_gene_168677;
• Additional information: details;

Expression of Ll_transcript_484436

FPKM

• PAB: 2
• PNAB: 0.6
• PS1: 0.1
• PS2: 1.4
• PS3: 0.7
• PW1: 0
• PW2: 0.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484436

• Blastp: Protein KINESIN LIGHT CHAIN-RELATED 2 from Arabidopsis with 52.85% of identity
• Blastx: Protein KINESIN LIGHT CHAIN-RELATED 2 from Arabidopsis with 52.85% of identity
• Eggnog: repeat-containing protein(COG0457)
• Kegg: Link to kegg annotations (AT3G27960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434353.1)
• Pfam: Tetratricopeptide repeat (PF13374.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;