| Id Trinity | TRINITY_DN49360_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_482999 |
| Sequence | CTTCATATATAAAGCAGGTGCCCCAAATTGTAATTGTTTTTCTTGGCTCTAGCGATTCATCCTTAACCTATCTGGTTCCTTCTTTCGTGGTTGCTAATCA ATCATAAATCCTCAATTGATTTATCACCTTTTCTTTTCGATTACATCTAATTCATCCATCAGCATCGCTAGGTTAATCTCTTTTACTTTTCGTACCAAAT TTATTTTTCGTTTTTATTTTGTTTTGTTTTTATAATTTTTGTTTTTTATTTCATTTATATCTCTTCACGTTATTTTTGTTGTCAGTTGATTTAATTGTAC TGAAGGAAATTGAGTGGGTGTGGTTTTGCAGTCAATTAGGGTTTGTGTTTTAGGGATCAAGTTGTTTGAGTGTGTTAGATGTAGTGAATTTTCTTGCTTT CAAATGTTTACTAAATTGTGATTGATCATTGGTTTCATGCAATTGCGTCTTTATGGTACTTTTTACCCCTGAATTATGATGTTAGTAGCTTTTGCTATCT GATTTTCGGGTCTTTAGGATCTGGGTTTTGATTATTTTGTATTGATTTACATGTATTAGAATTAAAAGGGTATTGAGATTTTGGAGATTGTTTTGTTATT GAAGGTTTTCTGTTAAACATAGGTCGTGCTATGCCAATGTTAGTGTTGGATACTATCATGTTACGATGATTTCTCTGTCAAAGAAAAAATGTATTTTATT ATGAAGTGGCTAGAATGTAGGCTTAACACTGGATAATCTAAATTGGTATGGCAGTTTCTGTGCATTCTAGCAGTGGTTTTGAAGTTTTCCACCATCAATA AGGGTTAATAAAATGATTTAAGTCTAACACTTTGTTGTGTCAGCATCTTGAGAATTTGCATGTGTAAAAGCCCGAATGAACTTTGATTCTAAGTGGAATT TTTTGTTATTTGACAGGTATGATACTTCAAAATTTGGGAAGGGCATGTTCTTTGACTTATTCCATTCACCTTTTTTAATCCTAGTTTGTGTTGTTAGTTC ATGCTTCTTGCCCATGTATATGCTTCATGTCAGCATATTGACATGGCAGAAGCATGGAATGTCTGTCATGAACTTGCCAGTTCAGAAATAAAAAATGATA ATGTTTTCAACAACGTGGAATTTTTTTATTTGCGTTAATATTTCTTTTAATAAACTCTCGCCTCTTGTCAATGATGGTTTTTTACATGGAAGATTGCTCT CTTTGTGGATTTTCTAAGATTGATTTTGCAGTTTCTGATTCAGTAGAAGCTGTTGTTAATTGTTCATATTAACCTTTCTATTAAGATTATTACTATTACA GATTTTTATAAGTCAATAACTGTTCGCTTTATTCATATGCTCTCATTTCTGAATGCTTTATGGTGTTTATTGAATCTCGTTGTTGATATCTGGTTTGGTC TTAATTTATAGTTTGTCACCTTGTTTGTGACATACATTCTTTAGTTGTACTTCAATATACAACACTATTTTTCTTTTCAAAGTTTTAAATGTCACCATAT ATTCAAAAGAAACAAAGTGTGACTTTAAACTTAACTGCATCATCTAAAATGCTTTGAAGCTTTCTTGTCAAACAGTGAGTTGCTGTAAACTACATTTTTC CTTTTGGCTGTTAGTTATGGACAAGGGAACACCACCTAGCCTCTTTGTTAATGATGGTTCATTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGAC AAGGGAAAGGATGCCAAATTAGAGGAGTCTAAACCAATTAAAATTGTTTCAGGATCCTTGACTTCTCCCTCCATTCGTAAGGCTAATGATACACAGAAAC CTTCTCAGTCTAGTTCCGGTGGAAAGCTTGCTTTCAGTTTAAAACAAAAATCAAAGCTAGTACCACCCCCTGTTAAGTTAGCAGATGATGATGAAGAAGA AACAGATGCTGGGGATGTTTCAAATGATGCACCGCTGAAACGGCAAAAAATGGGCCAGGAGGATGGCACCGAGCAGTCATTGAGACATCTTGATGTTGCA CCTTCTTCTCCAAGTGATCCTACAGTGAAGAAAGTAGCTGACAAACTTGCAAGTTTTGTGGCTAAAAATGGAAGACAATTTGAGGATGTTACACGCCAAA AAAATCCTGGGGATACACCTTTCAAATTTTTATTTGATAAAAAATGCACTGAATACAAATATTATGAACATCAGCTTGTTCAAGAGGAAAAGGCTCTTGC ACAGTCCAGGGAACCACAGGCCCATCATACTGGGGGTTCAAACATTTCATTTTCCAGGTCGTCAAATGGTCCTCAGAAGTCATCTCAACAACATTCAACC TACCAAATCCCAGCTTCTGTTTTATATGGGCGTACTCAAGAACCATGGTCTTCTGGATCTTCAGTTCAAGCATCATTAGCAGGAAGCACTGATGAACTTA GTGGATCATCCAATGCTGATTCTTTAGCACTAATGGAGTTCTACATGAAGAGGGCTGCACAGGAAGAGAGGTCGAGACGACCTAAGTATTCAAAAGATGA GATGCCACCTCCCGCTTCTCTTCAAGCAGCTTCTGGGAAGAAAGGCCATCACATGGGGGATTACATTCCCCTAGAAGAACTTGAGAAGTTCATGGCTACC TGTAATGATGCAGCAGCACAGAAAGCTGCAAAGGAGGCTGCGGAGAGGGCTAAAATTCAGGCTGATAATGTTGGCCACAAACTTTTATCAAAAATGGGTT GGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_168681; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_482999
| Blastp | SURP and G-patch domain-containing protein 1-like protein from Arabidopsis with 58.53% of identity |
|---|---|
| Blastx | SURP and G-patch domain-containing protein 1-like protein from Arabidopsis with 58.89% of identity |
| Eggnog | RNA splicing(ENOG410ZSH4) |
| Kegg | Link to kegg annotations (AT3G52120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453415.1) |
| Pfam | Surp module (PF01805.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |