| Id Trinity | TRINITY_DN49362_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_484707 |
| Sequence | CATCACTCTACTTGTTTTTATCTTTCTAGCTTAGTAGCTTCTGGTGTTGTTTGTAATCTATAAAAGTTGGATTTTTATGCTAACTTTGATGTTTTTATGC TGTGTACCATTTTGGTGAAATTTGTTTGTTTGCTGTCGAATTTAATCTAGCACTTGATGCTCCATTGTGATAAAAGGGTATTCAATAATGTCCCTTTCAT TTTCATCAGTCATTGACTCATTCCAGTGTTTTTGTAGAATTTGATGCCTTTGGTCTTTCCTTTGTTCTTAGATTCCCATCCTTTGGTCTTTCCTCTAGGA GGGGCAAACACACACCCCGAAAGAGATCAGCTTCTTACTCAAAAGGCGAGGAAATAGTATATGTAGTATTAAAAAATGACATTGGTGTTTTTTTCTTCTT GGAGTAGATGTTTTAATTGTTGTTGTTGTGGAGAAAGGAGAAAGGGGAATCTGCTTTACTTGTTGCAGTTTGATGAGCTGTTAGTTAATCCCATTGTTTG TTTATGATGTCTACTTTATGCTCTGAAGACTGAAAGGTTCACTTTCTTGTCTGAGGGAAGCATTTTCCCCTTTTTCTGAGCATTGCAATAGTAACTTGAT TTGATTTTGATCATAGGGTGTTTGAAAGAAAGAAGGTAAACAATCTTGTCATAGATGAGTAGATTATATTCTTCCCTTTTACTTTTTTTTATTATCTATG TGTTATTACAATGAGGGTTTTCTTTTACTTTAACTTCATCTCAGTCCTATAAAGCTGCCAAGTTATTTGTTCCTTGTTAAGTCCTGCAAGATATCTCTTC ACCCCAACTTAGTCAAAATTCAGTTCCCCTTTAATCATTTTTGCATTTGTTTATTTCTTCTGTTGAGTTAGGATTGTTGTAGTTGATTGATATATAAATA CAAGTTACTTTCTTTTAATCCTAGCTTTTTAGGCACTGTTGAATTCAGATGGGTTTTGAACATGGAAATGAGAGCATTCTGAAATGTCCTGAATCATCTG GTTTGAGCACAAATGTTTCAGAAATGGTTATTAGTTCTGTCTCTATGGATAAGCCCCATACCCCTTCAGATCATGTAACTAATCCTTTTCTTGCTTCTTC TGCTTGGGATCCACTTGTTTCATTGAGCCAGGCTCAAACTTTTGGAGGCTCTTCAATGGTTTCTCATAGCGACTTTGGGAGAAACTCATCTTACCCTCTT GTTTTGGAAGATCAAGGAATGAGTAGCATCTCTCACATTGTTCAATATATGTCTGAGTCAAATCTTAGAGACATGGTTTCCAAGGTTCCCTCCTATGGTA GTGGAAATTTCTCAGAAATTGTTGGAACTTTTGGTCAACCTGGGTTTGGTGACATAGCTGACACTGAGTATAGACCAGATTATAATGTGAGTAAGGATGC TGGAAATGAAATGGTTCCGATAATCGGTGAACAATCTGTGCTTGAGGATTCAGCTACTGAAGAGGGAGCAACAGGATCTCGACCTAGTGGAAATAGAAGA AAGAGAAGTATAGATCATAGTTCTTCTTTCAGTCCAAATAAGAATGCTAATAGTGATGTGCTGAAAGATTCCCCTGGGAAGAGCTCTGATGCTGCAAAAG AACATGAAAAGAAACAAAAACTTGAGCAGAATAGTAGTGCAGATTTGCGCCATAAGCAATCGGTGAAGCAAGCCAAAGAGAATTCTCAAAGTGGAGAAGC TTCTAAAGACGATTTCATTCACGTGAGAGCTCGAAGAGGTCAAGCTACAAACAGCCATAGCCTTGCAGAAAGGGTGAGAAGAGAAAAAATTAGTGAGCGG ATGAGGCTGCTTCAAGAACTTGTTCCAGGGTGCAACAAGATAACCGGAAAAGCAGTAATGCTGGATGAGATTATAAACTATGTGCAATCGCTGCAGCAAC ATGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAATCCAGAACTGAATTTTGATGTAGAGCAGATCCTATCCAAGGATATTCTGCAGTCGCGCATAGG AGGGCATGGAATTGGTGGATATGGTCCTAGTATAAGCTCTTCTCACTCATTTCCCAATGCAAGTGTCCATGGAACTATGTCTGGCATGCCTAGTACATCA ACACAATTCCATCCTTTGTCTCAGGTATACAGAGTAATTGAACATGTTAATCAGTTACTCTTTAGCTTATCTTGGTTGCGAAAAATTGCAAATAGTTGAT TGATATTCCTGTTACCGCAGTCTCTTTCGGATCACGAGTTCCAAAGCTTCTACGGAATGCGATAAGATTCCAGTACAACACTTGATAATTCGGGACCCGA TGGTAATATAGGCATAATCTTCTGAAAATAACATACCAGTACACCAATTTCTACACTAAGTTTATTATACTCGTGATAAAACAAGGGAATGTTACTCATT ATGTGGTGATTGAGGATGTTAACTGAAATTGATTATCAATCTTTATGGTGGTAATAGATTAATATTCTCAATTACCACATAGTATACCAACAAAGCGTTG GTTTAGTGATATAAAATCCCACTAGATTGCCATAAAGACCAAAAGGTCAAGGTTTCGACTCCTGAGAGCGACATTTGTTGGGAGAGGCAATCATGCACCC CGAAATAGATTAATTCCTTACCCAAAAGGTGAGGAGATTAAAAAATTACCACATAGTATTACTGTTCACTAATTTTTTGCACACTCATTATCAATGTGAA AATTGGTGTATGCTTAGCAAAACTACAATCTTTTTAATTTTGATTGTTTGCGCAATCAAGTAAAGTGTATAACTTCTTCTAATTTATTGTTGTTTCTTGA ATAGGGAGGTTGAAAACAGAGTTATAGTGTGTGGAATATATAGCATCATTTCTTTCAACAGAGACTTTGGAAATTTCAAGTTGACTACACAATTTAACTG AAGTTGAAAAGGAAGGGGAAATATAGAGGGAAAGAAAAATAAGGTGTGTAGTTGTATAGGATCTTAATACCTATAACTTTTGGCTCTTCTAATTTTCAGC AGAAGATGGCTTGCTAGATTTATCAATTGGAAAATTATAGTTACACATATTATGTGGAATATGTGTAAAATCAAGATCATTGGGAACAAGTTAAAGTGGT ATTCTTTAATGACATGGAAGGAAAAGTACTTGAGGATCATGCAACTCTTATATGATTATGTATAGAGTTGTAAGGTTCTTATTTTTGAAGCTCATTTGTT TCAACTAGTGTTGCACAGAAGTGTGTACTTTTGTAAGGGTTTTTGGTCGTCATTGTTTTTGGTTTTTTATAAAGAAAATGTAATGAAAGAAAAGGTTAAT GTATACCTAGGTGAAAATGTTGCAACATGCATGAGAGTGAAGATTGTTGAGTAAATCTTGCTTCAAAAAATGGTCTTTGTTTTGTGTTTCTCTTATAAGC TTTTTTAAAAGAATTGTAAGCTGCTTTTATTTGTTTTTTACCTTAATTCTATTCCACTATTATGAAAGTAGAATTGAAACTTCAATAAAGCTTAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_168694; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484707
| Blastp | Transcription factor bHLH74 from Arabidopsis with 40.44% of identity |
|---|---|
| Blastx | Transcription factor bHLH74 from Arabidopsis with 40.34% of identity |
| Eggnog | Transcription factor(ENOG4111DWU) |
| Kegg | Link to kegg annotations (AT1G10120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436981.1) |
| Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |