Id Trinity | TRINITY_DN49371_c1_g1_i29 |
---|---|
Name Transcript | Ll_transcript_484976 |
Sequence | CAAACTCAACCTAAAAAATAACATGTAACGAACTCGAGTTAAGTTTCGAGTCAAACTAATCTTTATCGAGCTAAATTAAACTGAACTCTTCAGGATGAAA TGGAGGACGAAAGAGCAGCAGAGCTTCTCTTCACACGCTTGCAGGATTCCCCGGATGATGCATCTCTTCATTTTGATATTGTCTCAATTTCAATTCATTT TTCATTTTCATTTCGTCTCAATTTCAATTCATTTTTCATTTTCATTTCCTCTCAATTTCAATTCATTTTTCATTTTCATTTCCTCTCAATTTCAATTCAC TAGTCATTTTGATATTGTTTGAACTTGAATTCGTTACTGATTTCTCCATCCACAGATGAGTTTAGTTATAATAATCTCATTGTTTTGTTTTGTCAGGGCA TATTGTTATGGGAAAAAGAAGACACTAAGGAAAAGGCTGCTCAACATTTTATCATATCTGCCAAATTGAACCCTAATAATGGACAAGTTTTCACATATCT GGGCCATTATTATAGCAGCACTAGCAATGACACTCAGCGAGCCATTAAGTGTTACCAACGAGCTGTTGCGCTCAATCCTCTTGATTCCAATGCTGGGGAA GCTCTTTGCAACTTGCTTGACCAAGGAGGAAAGGATAGTTTGGAGGTGGCAGTGTGCTACGAAGCTTCTCAAAACTCACCCAGGGCTTTCTGGGCTTTCC GTAGATTGGGTTTGCTGCAGCTTCATCAAAACAAATGGCCTGAAGCTGTTCAAAGTCTTCAACATGCCATACGAGGCTATCCCACTTCTCCTCATTTGTG GGAAGCTTTGGGCCTTGCTTATCACCGGCTCGGCAGGTTTACTGCTGCTCTAAAGTCTTATGCCCGAGCCATTGAATTGGATAATACCATGCTCTTTGCT TTCATTCAAAGTGGAAATATCTCCTTAACTCTTGCTTCATTTAGAAAGGGTGTTGAACATTTTCGACAAGCTCTGGAGATTTCACCGCAATCTGTGCCTG CACAATATGGACTTGCTTTGGCACTGCTTGGTTTGGCAAAAGATTGCATTAACCTGGGAGCATATCAGTGGGGGGCTTCATTGTTAGAGGAAGCATCTGA GGTTGCTAGGGCATGTGCTTTTTTTGTTAGGAATGTCTCATGTATTTGGAAACTGCATGCTGATATCCAGCTTACATATGCAAGATGTTTTCCTTGGATT GAGGATGTCCAAGAATTGGAGTCCGATAAGGAGGCTTTCAGTGCTTCCATTATTTCTTGGAGGATGACCTGCTTGTTGGCTGCAAGACGTGCAATGTTTT CGTATCAACGAGCCCTGCACTTGTCACCATGGCAAGCAAACATCTATGCTGACATTGCAGTAACTTCAGATCTTATTACTTCATTGAGTGAGAATTGTAA ACAAGACTCAAGTGCATGGCTACTGCCAGAGAAGATGGCTGTGGGAGCCTTGCTACTTGAGGGTGACAATTATGAGTTCTGGATGGCTTTGGGATGTTTG TCGCACCATAATGCACTTAATCATCATGCTTTAATCAGGGGACTGCAATTGAATGTATCTCTAGCTGTTGCTTGGGGATATCTTGGTAAGCTGTATTATA AAATGGGTGAAAAGCAACTGTCAAGGCAGGTATTCGATCGTGCTAGAAGTATTGATCCTGGCCTTGCATTGCCATGGGCAAGCATGTCAGCTGAGTCTTG TATTAGGGAGCTTGAACTAGATGAGGCATTTGAGAGCTGTTCACGAGCTGTGCAGATAATGCCTTTAGCTGAATTCCAAATTGGTCTCACCAAACTTGCT TTGCCAAGTGGCCGTCTGTCATCTTCACAGGTTTTTGGAGCTATTCAACAGGCTGTGCAGCATTCTCCTCACTATCCTGAATCCCATAATTTACATGGGC TGGTTTGTGAGGCTCGAAAAGAGTACAAGTCCGCTGCTGCTTCTTATAGGTTAGCACGTCATGCAATCAACATTGGCTCATGGAATATTGCAGACTCACA AGTGAAGGATATATCAATCAATTTGGCCAGATCGCTTTCTTTGGCAGGGAATGCTGTTGATGCTTTGCAGGAATGTGAAAATTTGAAAATCCAAGGGGCA CTTGACGCAGAAGGCTTACAGGTATATGCTTTCTCATTGTGGCAACTTGGTGAAAATGGTTTGGCTCTCTCTGTAGCTAGAAGTCTTGCTGCAACTCTTT CTTCTATGGAAAAGGCATCTGTTGCCACATCCATATGCTTCATCTGTAGATTGATATACTACATGTGTGGACTGGATGCGGTCATCACTAACATTGTAAA AATGCCAAGGGAGCTATTTCAAAGTTCAAAAGTTTGTTTTGTTATGTTGGCTATCAATGCTCTTGATGGAAATAATCGTCTTGGATTTGTTGTCACAACT AGCCGATATTTTCTCAAATATCATGAAGAAATTGCCAGGATGCACTTTTTAATAGCGCTTGGTAAACTGGTATTTTTTTAGCCTCTTAATTTTGCTTCCT CCCCTGTCTCCTATTTCCCCCAAAAACGCTTTACATGAAAATGAGGTGGAAAACGTGATATTATGGTTTTGACAGGTCAAAAATGGGTCTGTTTGCTGTC TTGATGTTCAGAGTGGAGTTGCCTACCTCAAAAAAGCTATGCACATGTTCCCTAACTGTAATTTGATGAGGTGGAGCGGGTACTGATGTGTATAGTAACA CAACTCAAGTGTCCTGCCACCTTATCTTTTCTCATCCTCAGTGTTTATCCCTCTGTCCTCTCCATGAATCCAACAGTTCAGCCTTTCTATGTTGTCACCT CAATCCCAACTCACCATTGCTTGTCACAATGGCAGCGCTGGTTCAAGTTTTGACTGCACCAGTTAGACTAACATTGAAGTTCACTGGGTCCAAAAATACC CCGCACTTTCTTAAAATTTCTTATTTTTTCCCCTATCCATTCAGGCTGGCCTGTTATAATTCCTTCAAATTATGTAATTAACATACAACAACCAAGCCTT AACATACCCTTCCTTAAATTGTATGGAAGAACCTTCTTGGCTATCTCTTGCTATCCAGTAAAGAGTTAAACGATTGTCATGTGGCGATAAGATGCTGTAA ACTGGGGCATCTTGATCTTTCTGATGAAGAAGGTTTAAAATCAGCTTTTGATATTCATGGTGCTGGAGCAGTTGCTTGCTATGCCACTAGCAACAGCAGT CCGAAGTTTACTTTTCCAACTTGTACGATGCAGTGTTCTAGTCATTCTGGAGCTATCAGATACCTGCAGAAGTACTATTTTTCTTTCCCTTTATGCCCAG TAACTGCCCAAAAATTAAAATCTTATTATATTGCTGTTTAACATTCACCAAGGTAAGTAGGGGGAAATTATATTCTTAGGGGGAAATTCAAGTACAACTG TTGTAGAGTATTCTGTTTTTGGGAATAAATCTTAATTTGTCACAAGTTTAATGACTGTATCTGTAGACATCTAGTGCCATTATTACAAGGACAAGAATAA TCATCTTACACCCCCCCCCCCCCCTCAAATTGCAGATCTTTTCACCAGAAACCTTGGAATCATGATGCCCGGTACTTGATTGTTCTTAATTATCTTCAGA GGGCACGTGAAGAGAGATTTCCTCATCATCTTTGTGTTATACTAAAGCGTCTAACTCATGTTGCCCTCGCAAATGAATTGTATAGCAAGACAGAAATGTT GTATCAATATAGACACTTCCAACTTCTACTTTGTGCCTCTGAGATCAGTTTACAATGTGGGGATCACATTACCTCTATCTCTCATGCGAAAAAGGCTTCT GAACTTGTGCTTCCTGATGATTACTTATTCTTCGCTCATCTACTACTGTGCCGTGTGTATGCCATGATAGGCGATCATCTAAATTTTAAGAATGAGTTTG CACAATGCTTGGAGCTTAGGACAGATTGCCATATTGGTTGGATTTGTCTCAAACTAATGGAATGTCGGTATGAACTGCAAATCAGCTCCAATGTCATAGA TCTGAACTTTGAAGAATGTGTTCAAAAGGGTGGAAATTCATGGAATATGTGGATGGCTGTATATAACCTAGTGAGAGGTATGATTTCCTTGCAGAACAGG GATTTATTCTCCGCAGAAGAGTTTATGGGGCAGGCTTGTTCTTTGACAGGTTTTGAGAGCTGCCTCTTTCTATGTCATGGCGTTATTTGTATGGAGCTTG GCAGGCAGCTCAATGATTCTAAGTTCCTATTACAAGCTGCTATGAGTCTTACCAAAGTTCACGAGCTTTCATTAATTCCCTTGCCTCTTGTCTCTGTATT GGTGGCTCAAGCAGAAGGAAGCCTCGGTTCTAAGGAGAAGTGGAACAGAAATCTTTCGTTTGAATGGGATACTTGGCCACCAGAAATGAGGCCTGCAGAG CTTTACTTTCAAATGCATTTGCTTGCAAGACAGTTGAAAGTTGGGGCCAACTCTACATATAGCATAGTGTCCACTCAGACTCCTCAGAGATGGGTTCTTC GGGCAATTCATGTGAATCCTTCTTGTATGAGATATTGGAAAGTTTTACTGAAGCTTCTGGAGTAGATTTACAAGTGAATGGAACCTGTTTCAGGATATTG TCTATGTATCACTTCTATTGTCTATTCAGGATGAGAAACGTCTAAGCAAGTTGTTACCAATGTTGTAATTGTAATAGTTAACTAAGGCATGAATCAATTG AAAATAATTTTATAGTGAACAAGAAAGAAAAAGTAAATAATGTGCTTATTTCAAGGGTAAAATTTACTATTTGCTCTTTACAGAGGCACATCAAAATATT TATAATCCTTTTACCTAGAAGAGAGAATTTTGTTATTTATGTGAAATTATGTCACTTTGTATTGCATTTATATTAATTTAAAATGTGAAATTATGGGCAT GGGGTCATAGTTTGAAGCATGATGAAGACGCTAGTTAAATGTAAGAACTAAGAAGTAACATAGATGAGCATGAGAAAGGTACGTGATTCTTGTAAACAAT ATACATTAATAGTATATGAATTTTAGACAAAATGGTTGTTTGGAGAATCTAAAGGAGAGATATAATGATAAGGATAATTAAGAAAAATAAAATGTGTTAT ATGAGAAAAGATGTATGTTTATTTTGTGTGGTTGTTGTTGTTGAGTTGTGTAAGTAGGGGAATAATGAATAATGAATAATGAATCTTAATAAATAAAAAA AGAGAAATAAATAGATAGAGTTAGTGGAGTGAGATAGATAGGTTTAGCAGAATGGAAAGAGCAGTAGTTGTTGGGTGTTCCTGCACCACCACCACTCGAT ACTTCTTCTCTCGTTCTTCTTCTTCTTCCTCTTCTCTCTTCTTCTCTCGTTCTTCTTCTTCTTCCTCTTCTCCCTTCTTCCCTCGATCCTCTTTCTCCTA TCTCCCTCGCCCTCGCCGCTACCACTCCACCATTACAACAACAACAACTACTACTACTACTACTACTACTTGTTCTAGGAGAAGGAGAAGGGACCTCAAC CTTCACCGCTTCTCTTCTCTCTCCCCTCGAGCCTCCCTTCCCTCCGTTCCTCCTTCTCCTCTTCCGTCTCCTCATTTCCCTCAACTCAATCACCAACTTG CTCATCAATTGGGTTTTCAAATAGTTTCCGAGGAATTCATTTCTGAATGCAAATCCAAAGCCGTGCTCTTCAAACACATCAACACAGGGGCTGAGGTCAT TTCTGTTTCCAATCACGATGAGAATAAAGTCTTTGGCATTGTTTTCCGCACTCCTCCGAAAGACTCCACCGGTATCCCTCACATCTTGGAGCATAGCGTG TTATGTGGCTCACGCAAATATCCTCTCAAAGAACCCTTTGTTGAACTCCTCAAAGGAAGCTTGCACACTTTCCTCAATGCATTCACCTATCCCGACAGGA CCTGCTACCCCGTTGCTTCCACCAACACCAAGGATTTCTATAACCTTGTCGATGTCTACCTCGACGCCGTCTTCTTCCCTAGATGCGTTCAGGATGAGCA TACTTTTCAACAGGAGGGTTGGCACTTTGAACTCAATCATCCCTCTGAAGATATCACTTACAAAGGTGTTGTCTTTAATGAGATGAAGGGTGTCTACTCT CAACCTGATAATATCTTAGGCAGGACTGCTCAACAGGCTCTTTTCCCAGACACTACCTATGGTGTTGACAGTGGTGGTGATCCCCGTGTTATTCCAAACT TGACATTTCACCAGTTTAAGGAATTTCACCGCAAGTATTACCATCCCAGCAATTCACGAATATGGTTTTATGGAGACGATGATCCAAATGAGCGCCTCCG CATACTGAGCGAGTATTTGGATATGTTTGATGCAAGTTCTGCTCCAAATGAATCAAAGGTCGAATCACAAAAACTATTTTCAAAGCCAGTCCGGGTTGTT GAGAAATATCCGGCTGGTGAAGGGAGTGATTTGAAGAAGCATATGGTCTGCCTTAACTGGTTGCTCTCTGAGAAGCCCTTAGACTTGGAAACTGAGCTTA CACTTGGATTTCTGGATCATCTGTTGTTGGGAACTCCTGCATCGCCACTGAGGAAAATTTTACTAGAAAGTGGACTAGGTGATGCCATTGTTGGTGGTGG TGTTGAAGATGAACTACTTCAGCCCCAATTTAGCATTGGAATGAAGGGTGTTTCTGAAAACGATATTCATAAAGTAGAAGAGCTGGTCATCCACACACTT AAACAGTTGGAAAAGGAAGGTTTTGATGAAGATGCTATCGAGGCTTCTATGAATACAATTGAATTTTCTCTCAGAGAGAACAACACTGGGTCATTTCCCC GTGGCTTGTCACTCATGCTCCGGTCCATTGGTAAATGGATTTATGATATGAATCCGTTTGAGCCACTCAAGTATGAGAAACCTCTTCAAGATCTAAAATC TAGAATTGCAAAGGAGGGCTCTACATCTGTTTTTTCTCCTCTAATAGAGAAATTCATCTTGAACAATCCTCATCAAGTTGTTGTTGAGATGCAGCCTGAT CCTGAAAAAGCTGCTCGTGATGAAGCCACAGAGAAAGAGACATTGCAGAAAATCAAAGCTAGTATGACAACAGAAGATCTGGCAGAGCTCACCCGTGCTA CTCATGAACTTCGGCTCAAGCAGGAAACTCCTGACCCACCAGAAGCTTTGAAAGCTGTTCCTAGTCTTTCTCTACTAGATATTCCGAAAGAACCTAGTCA TGTTCCTACTGAGGTTGGAGATATAAATGGAGTAAAAGTTTTGCAGCATGATCTCTTCACAAATGATGTCCTTTACACTGAAATAGTATTCAATATGGGT TCATTGAAGCAAGAGCTTCTTCCCTTGGTCCCATTGTTCTGCCAATCATTGCTGGAGATGGGCACGAAGGACTTGACCTTCGTCCAGCTAAACCAATTGA TTGGGAGAAAGACCGGAGGAATATCGGTCTATCCATTCACATCATCAGTGCGGGGTAAGAAAGATCCATGTACTCACATGATTGTTCGAGGCAAGGCCAT GGCTTGGTGCGCTGAAGATCTTTATGATTTGGTTAATTCTGTTCTTCAAGATGTACAATTTACAGACCAACAACGTTTCAAACAGTTTATTTCCCAGAGT AGATCAAGAATGGAGAACCGGTTAAGAGGCAGCGGTCATGGAATTGCAGCTGCAAGAATGGATGCAAAACTAAATGCTGCAGGCTGGATCTCAGAAAAGA TGGGTGGTCTCAGTTATCTCGAATACCTCCAAACTCTTGAAGAGAGAGTTGATCAAGATTGGGCTGCCATCTCATCATCTCTTGAAGAGATTCGCAAATC TGTGTTTTCCAAGCAAGGTTGCTTGATAAATATCACTTCCGATGGGAAAAACCTTGCAAACATTGAAAAAGTTGTGAGCAAATTTGTTGATATGCTTCCT ACCAGCTCTCCGATTGCAGCAACTACTTGGGATGTTAGACTTCCATTGACAAATGAAGCTATCGTGATACCTACTCAAGTTAATTACGTTGGAAAAGCGG CTAACATTTATGATGCGGGTTATAAGCTTAGTGGGAGTGCATATGTTATTTCTAAATACATTAGCAATACATGGTTGTGGGACCGTGTACGTGTTAGTGG TGGAGCTTATGGAGGTTTCTGTGACTTTGATACCCATTCAGGAGTGTTCTCGTTCTTATCTTATCGTGATCCGAACTTGCTGAAGTCACTTGATGTGTAT GATGGAACCGGTGACTTCTTAAGAGGACTGGAAATGGATGATGACACTCTAACTAAAGCCATAATAGGAACCATTGGGGATGTAGATGCCTATCAACTTC CTGATGCCAAAGGTTATAGTAGTATGTTGCGGCACTTACTGGGTATAACAGAGGAAGAAAGGCAAAGGAGACGTGAAGAGATATTATCTACTAGTTTGAA GGACTTCAAAGAATTTACAAATGCAATGGAAGCAGTTAAGGATAAGGGAGTTGTGGTTGCAGTGGCATCTCCAGATGATGTAGATGCTGCTAACAAAGAC CGTTCCAACTTTTTTGAAATAAAGAAAGCCATTTAGATTCAACATTTATTATTTTTGTTATAGTTATGATTTTCAAAATTAATATTAGACTCAACTTGAA AAGCTATCTCATAGTCCTAGGGAAAGTGAATAAGCATTGTTTGGCTGCAATGAATCATGCAAGTTTCCAAACAATGTGGTGACAATATTCTTTGACTACT GTTTGAGTTTGGTGACAATTTTTAAGTTCATATTTTATTTTTCTGATTCATAAAAGTTAATATTTAACCATGTGGGTCTGAATGAGTAATTATAAAAGTG CAAAAAGGTCTTTCTACTTGATGCACACACATTTATCACACAGATTCCCCGTATAAATATGTCTTTATACTTTTATAGGTTAAACATGATGTTCACGTTC TATTTAAAAATGAAAAAAGAAAAACTACCATCATTTTCTCATTTACTTATTCTCTTA BLAST |
Tissue | pods |
Gene name | LI_gene_168776; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484976
Blastp | Presequence protease 1, chloroplastic/mitochondrial from Arabidopsis with 77.62% of identity |
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Blastx | Presequence protease 1, chloroplastic/mitochondrial from Arabidopsis with 78.62% of identity |
Eggnog | peptidase(COG1026) |
Kegg | Link to kegg annotations (AT3G19170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020237092.1) |
Pfam | Insulinase (Peptidase family M16) (PF00675.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |