| Id Trinity | TRINITY_DN49374_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_484559 |
| Sequence | GAAAGCAATGCATAAATCAGAGTATAATAACTCCCCTCATTATCCACACAACAAGATAAACGGATAGGGTTCCATTCTTAATCTTCTCTCCCATCTCTTC TAACAACAGCACCAACCCCAAAACATTAAATAACACAAATCACCAAAAAACCAAACCTTTATTTCATCACTTCCATGTCCTTCATTCTCTAATCCCTAAC ACCATTTCTTTGGATCCGGATTCGGATCATAACCATGACCCGACGATGTTCCCATTGCAGCCACAATGGTCACAACTCTCGTACATGTCCCAACCGAGGG GTCAAGCTATTTGGGGTTCGATTAACTGATGGGTCCATTCGAAAGAGTGCTAGTATGGGTAATCTTTCTCACTATGCTGGTTCATCTGTCTCTGGTGGAC CCCTACTTGGTGGTGTTGGTGGTGAAACACCTGATCAACCTTCTGCTGCTGTTGTTGCTGATGGTTATGCTTCTGAGGATTTTGTTCCTGGTTCCTCTTC TACTTCCCGTGAAAGAAAAAAGGGAATTCCATGGACTGAGGAAGAACACAGAATGTTTTTACTTGGATTGCAGAAGCTGGGAAAAGGAGATTGGCGTGGA ATTGCAAGGAACTATGTTAAATCTAGGACACCAACTCAAGTGGCCAGTCATGCTCAGAAATATTTCATCAGGCAAAGCAATCTGTCTAGGCGGAAAAGGC GTTCCAGCTTGTTCGATATTGTTGCAGATGAAGTTTGTGCTCTTATTCGCAAATACTATCCATGAAATATGTGTTTATTTTACATCATGATGCATATAAT CTGTCCATACCAAATAAACTTTCTTTAATTGTACGACATGCTATGGAAGCATGGAGTGGACATGCTTCCGACACTGACACATGTTGTGCACTTCCTATTT AAAAAAAAATTATCAGCTCGAGCACATGTCGAACATGTTTGGGACACAGTTTGGACACTCAGACACCATCCCAAAATAGCTTGACACATGCTCACACTTA AATTATGCGATGCCTCTTTTATTTTCATGAGACTTGTTGTCAAAGGGGAAATGTAAAGCCTAGCCAGTTTTTTTTAGAAGGTGAAGATATAAATTCTGAT TCTAAGTTTAGATCTTTTGTCATGTTGTTCCTATTTAATTTCATTTGACTTGCTCATATATGTGTCTTTATTTTGGACATTGTTCTGTTCTTATCAAGTG CTCGAGTCTGCTTGTGTTCTTCATAGGTGTCATTTATAATTTGTGAAAAAAATCCATTTCCTTTCTTGTTCTGCTGAGCATTTGAGCAATCATGGACTTG TTTGTTTACATTATTTATAAAATCATAGATGTAGGGTAGTTTGTCCTTCTCATTTTTTCCATGATTTTGCAGGCAGCTGAAGCTCCAATGGTAGAGCAAG ACTTCTTGTCTGCTAATCAGTTTGAAGCTGACACAGAAGGCAATAACCCCTTGCCTGCTCCTCCTACCCTCGATGAAGAGTGTGAATCCATGGATTCCAC TAACTCAAATGATGGCGAGCCTGCAGACCCTGCACCATTAAATCCTGATATTAACTCAGTATCATCTTATCCGGTGATGTACCCGGCATATTATTCTCCT TTCTTCCCATTTCCTCTGCCTTATTGGTCAGGATACAGTCCAGCAGAGCCCGTGAAGAAGGAGGAGACGCATGAAGTATTGAAGCCGACTGCAGTACATT CTAAAAGCCCTCTCAATGTTGATGAGCTTGTAGGCATGTCCAAACTGAGTTTAGGAGAGACTATTGGTGACTCCGGCCCCTCTACTTTGAAACAAAAACT ACAGGAAGAAGGACCCTCTAGACAGTCAGCTTTTCATGCAACTCCGGCGACAACCGCGTGTGGTAATTCGAGTATGACTGGCAATGTCATCCATGCAGTT TAAGGGAACTGTTCTATCAATACTGAGGGGAGGGGTCATGAATGTAGTTTGTGTCCATCATATCCCATATTGTTGTGGAATAACCTAAATAATTTAATTT TTCATTGCCCCTTCACTGTGTTTAACCTAATTTGTTTCCTTGCTGGTAGACAGTAGTAGCATACAGGGTCCAAACTATATAACTGTGTTTGTTCAGTCAG GTATATGTAAAGTTGATTGTGCAGTTTGACACTACCAATTTGTGTTTCCTATTCTAGTAATGGATTAATAGATTTAGGTGTTGTCCAATGAATTGTTATT TATTACTCTATACACCCTATTTAACCTTAAATGTCTAAGGTTTTGAGCATAATTTATACTACCAACCTATACAATGTTTTGACTTATTTTTTTAACGATG TTGTTCCTAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_168795; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484559
| Blastp | Transcription factor MYBS3 from Oryza sativa with 76.47% of identity |
|---|---|
| Blastx | Transcription factor KUA1 from Arabidopsis with 80.37% of identity |
| Eggnog | Transcription factor(ENOG4111IMA) |
| Kegg | Link to kegg annotations (4349385) |
| CantataDB | Link to cantataDB annotations (CNT0000425) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446068.1) |
| Pfam | Myb-like DNA-binding domain (PF00249.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |