Ll_transcript_482481

• Id Trinity: TRINITY_DN49377_c5_g1_i2
• Name Transcript: Ll_transcript_482481
• Sequence: ATATACACATATACCTCATCATATGTCATTTATTTGGATTACATTTTTTGAAAAGTCAACAATAATCAAATATAATGATACACACGGAGTGTATACATCC TTTTCTCATCCTATTTTTATATTTAAATCCAAATAGGAATAATTATTATTATTGTTATTATATTTGACATGTCATGTTTAAGAGTTTGAAATGTATACAC ATACATTCTATCATTCACCATTCATTTGGATTACATTTTTTGAAAACTGAACAATACTTAAAAATCAATGTTAATAATGTAATGACAGTGTATAAAACGC ATACACTGCCAATGCATACATCCTTTTCTCTATGTTTAATGAGAGCATGATGCATCAGCATTTTTTTATTTTTAGGAAATCTTTTTATTATCATTTTACT ATCTTTTTAGTATTTTTTCATCATCTTTTATGTATTTTTTAGTATTTTTCTTTAGTATTTAAACATTATTGAAGATGTAGTCAAACAATAATATTATTTC ATTCATAAAATTACGGAGTTTTCTCTTTCTGGTGGATTCCAGTGTTATCCCTTCAACTTTGTCGCTTGCAAATTTGTTTTTCATTATAGGATTGACGTTG GCCTTCCCTTCACGCTTCCAACCGCATCAGATTAACTATATGGGGTCTTTAACTTAAGGATTTTTTAGGAAATTTTTGTATTTGCTGTGTTTCTTTGTAT GGTTTATATGAGATTTGTTAGTGTGTTATAATATCAGTTTTGTGTGGTTATAGTTTTTAAGGATTTTCTTACTTTGTTGGTTGCTTTAGAAATAGGAGAC ATCCTGTGAGAGTGTTAGTTTAAAGTTTGAGGTTCGGTCATTCAAGCCGGGTTTGATATATTTGTAATAGAACAAGATAAGTTCATAAAGTGTTTGAAAG ATATGGTGACACTTATCTGATTTTGGTGTTGCAATGATGTAACTTAGATTTTGATGGATCTTGGCAACTCGAACTTATCTGGACACTTGGTACCTGAACT AGGGAAGCTGGATCATCTGCAACATCTGTATGTTATCCAATCATGGGTTGATATTTATACAGATTTTTTGATTTCGCATATGTTAGATGTGCTCATTTGG TTATCAAGATGATAACCTAGTATTGTTTATTAGCATTTACTGTGATTCTTCTCTCTGTTTTTGTTGATGTAGTGAGCTATACAAGAACAACATCCAGGGG GTTATTCCTCCGGAGCTCGGAAACCTGACGGATCTTCTTAGCATGGACTTGTACAATAACAACCTATCAGGCACCATCCCTCCTTCACTGGGGAATCTGA AGAATCTTGAGTTTTTGTGAGTCTGGTTAATCTATCATTAATCTTGCTACATGGGACTGACATGACATACCTTGCCACATTTCTGATAAGACTTCACTTG TAATTATTTTGTGGCATAGATTATTAAACAGCTTGCATGATTCTAAACAGTTTTTCTTCGCAGGCGACTGAATGACAACCGATTAACTGGCCCAATCCCC AAGGAACTTGCCGACCTTCGAAACCTTAAAGTACTGTAAGTCATTTTCTCGCCTTTTTAAGTTGATAAAACTATATGGTGATATCATGAAGATGTGTGCT TACAAAGAGCATAAACATTCACTTTATCTTCAGGGATCTCTCGAACAATAACTTATGTGGAACAATTCCTACCTCTGGGCCATTCGAGCATATTCCATTG AATAAGTAAGTCGCAAAATATCCTATCTAATTATCTCTAACCATGTGGCTTTCTTCTTACTCTCCATGTGATGCTATCCATGTCAGTTATCCCTTTCTTT TCTAGTTTCCTATATATTTTTTAGTTATTTCTGGGACTGGGGGACTTAACAATGAGCACTCATATATGTCTATACTTCTGTTGCAACTTGTGTTGCTTTA GTGATTGAGTTGTTGAAATCCTGCTAATTTGTGATGGCGATATCGCTGATCGCTGTTCTATACAACGAGTCCGACCACTTACGATGTATGTGGTAGATCC ATGCTGCAGCCACATGCTATTTGATAGGCCATCCCGGTGGCTGGTGCAAAAGGTGTACTGATTCTGAAATAGTTTGAAGTTTGTGTTACAGAATCTAGCT AGAGCATATGTTTCTGCTAACTGGCTGTGTTTTTTCCTTCCTGTTATTTATTGAATGATGAATAAGTATTGTTTTGTTTCAATGTTCTAGCTTCGAGAAC AACCCTCATTTGGAAGGTCCGGAGTTGTTGGGACTTGTACCTTATGACACAAACTGCTCCTGAATAACACGGTGCTCCGGGATCTCTCAATCTGAGTTGC ATTATATAAGTGTATGCTAAAATCTAAGTTTGTTACCTCTTAGTGTAATGGGCAGTGGTAAATGTAATTCCTCTTATGTGTAAATCTTACAGTTATTGCT CTGTAAAAATTTCATAACATACAATAAGTATACTAGCTACAGAAAGTTTGCAGTAAGTTTGTTGATATCAACTGATGAACAGAAAACAAATCTTAATAAT AACAGCAACCCAATCTCATTTCATTA
• Tissue: pods
• Gene name: LI_gene_168824;
• Additional information: -

Expression of Ll_transcript_482481

FPKM

• PAB: 0.1
• PNAB: 1.4
• PS1: 2.8
• PS2: 0.1
• PS3: 0.9
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_482481

• Blastp: -
• Blastx: Leucine-rich repeat protein 1 from Oryza sativa with 43.09% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (4327564)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455885.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;