Ll_transcript_484320

• Id Trinity: TRINITY_DN49380_c0_g4_i1
• Name Transcript: Ll_transcript_484320
• Sequence: AATAGAATGTTTTTTGAAGTATTTATATGGAGTACACACAAAACAAGACCAACCAGAAGCAACCACTTAGAGGTTGTGGAGAAGCAGATTCTTCAGTTTC TGAGTGCTTATCTATTGGCCTGTGAGATTCAATGGCTTCAGTGTGTGCAATCAAATTCTTTCTATGCTTACTTCTATGGCTCTTCAACTTTCTACCTCTT TCTCAAGGTAATGAAAACTCAAATGAATATAACTATCCATTTATCAAAAAGGCAAGCACATTCTCATCTTCACCATCAGATTCAAAAACCACTACCAAAA ATGGCTATGACTACATAATAGTGGGAGGAGGCACAGCAGGGTGCCCATTGGCTGCAACACTTTCTCAGAACTTCAGTGTTCTTGTTCTTGAAAGAGGAGG AATCCCTTTCACTAACCCTAATGTGTCATTTCTAGAGAACTTTCACATTACCTTGGCTGATACTTCACCTACTTCAGCTTCACAATTCTTTATCTCAACT GATGGAGTCCTCAATGCAAGGGCAAGGATTTTGGGTGGTGGAACTTCCATTAATGCTGGCTTCTACACTAGAGCAAGCACAAGATATATAGATAATGTTG GATGGGATCCCAAGCTAGTAAATGAGTCTTATCCATGGATTGAAAAGCAGATTGTTCATCGTCCAAAGTTTTCAGCTTGGCAAAGAGCAGCAAGAGATAG CCTTCTAGATGCTGGTGTGTCACCTTTTAATGGCTTCACCTATGATCATAAATATGGTACCAAGGTTGGTGGAACCATTTTCGACAGATTTGGTCGCCGC CATACTGCTGCTGAACTTCTTTCTCAAGGAAATGTTCACAAACTTACTGTTTTGATCCATGCCACTGTCCAGAAGATTGTTTTTGATACAACAGGAAAAA GACCAAAAGCTATGGGGGTTATTTTCAAGGATGAAAATGGGAAACAACATGAAGCAATGCTGGGAAGTGATAGACACAGTGAAGTGATTGTGTCTAGTGG GGCAATTGGGACTCCTCAATTGCTATTGTTAAGTGGAATTGGCCCAAAACCAGAACTTGAGAACTTGAACATCTCTGTGGTGCTTGACAACAAATTTATT GGAAAAGGCATGGCTGATAACCCCATGAACACAATTTTTGTTCCTTCTAAGAGACCAATTCAGCAGACACTCATAGAAACTGTTGGTATCACCAAATTGG GTGTGTACATTGAGACTAGTTGTGGCTTTGGCCAATCAAACAATAGCATTCATTGTCACCATGGTCTCTTATCAGCTGAGATTGGGCAGCTTTCCACAAT TCCTCCAAAGCAAAGATCAAGAGAAGCTGTTGAAGCCTTCATCAAGAACAAGAAAGACATACCAATTGAAGCATTCAAAGGAGGCTTCATCCTATCAAAA GTTGCAAATCCTTGGTCAACAGGTGAGCTCAAATTGATCAACACCAACGTGGAAGACAACCCTGCTGTTACCTTCAACTACTTCAATCATCCATATGATG TTCAACGCTGTGTTGAAGGGATACGCT
• Tissue: pods
• Gene name: LI_gene_168859;
• Additional information: details;

Expression of Ll_transcript_484320

FPKM

• PAB: 0.5
• PNAB: 21
• PS1: 5.9
• PS2: 0.2
• PS3: 0.7
• PW1: 1.7
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484320

• Blastp: Protein HOTHEAD from Arabidopsis with 67.34% of identity
• Blastx: Protein HOTHEAD from Arabidopsis with 69.53% of identity
• Eggnog: oxidoreductase(COG2303)
• Kegg: Link to kegg annotations (AT1G72970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436495.1)
• Pfam: GMC oxidoreductase (PF00732.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;