Ll_transcript_484987

• Id Trinity: TRINITY_DN49381_c1_g3_i1
• Name Transcript: Ll_transcript_484987
• Sequence: AAAAAAACCCATCGAATCGCGAGTGTGAAGAATCGGTGATTCTCTCTTCGCACTTTTCTTCATCAATTCTCATTCTCTTTTATTCTCTTCATTCTCTTTA TTTATTTAATCTTTCAATTTTTCAATTTCATTTTTTCATATACATTGATTAATCGTAACCGTTTTTCAACTGATTTTTCTCATTCTAGGGTTCCAATTTC GATTACTATGGATCATGCTGAATTAACCACCGATCAGGTTCTGACGAGGGATATTCCATGGGAGACATACATGTCAACCAAGCTCATCTCTGGAACAAGC CTGCAGCTCTTTCGCCGTTACGATCACCGGCCAGAAAGTGTCAGAGCACAGTTGCTCGATGATGATGGTCCGGCTTACGTCCAGGTGTTTATTCATGTTT TGCGTGATATTCATAAAGAAGATACTGTTGAGTATGTTTTGGCGCTAATTGATGAAATGCTTTCAGCAAACCCGAAAAGAGCAAGGCTGTTTCATCATAG CACCCTTGCTGATGAAGATACATATGAACCATTCTTAAGATTGCTTTGGAAGGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATA CTTAGTGCCAGGCCAAAAAATCAGAATGGAATTGTTTCAAATGGAGAAGCATCAAACTCAAAGAAGCCATTTTCCACTATCGATGATGCTTTGATAGGAT TGGTAAAATGGCTTTGTGAACAGTTGAAGAAACCTTCTCACCCTAATCGTGGAGTCCCAACTGCTGTCAATTGCCTTTCAACTATACTTAAGGAACCTGT GGTTAGGTCTTCTTTTGTTCAAGCAGATGGAGTGAAGTTGCTTGTGCCATTGATTTCTCCGGCATCCAACCAACAGTCTATTCAGCTTCTTTATGAAACA TGTCTCTGCATATGGCTCTTATCTTATTATGAGCCGGCAATTGAATATTTGGCTACTTCAAGGGCCCTTCCGCGACTGATTGATGTTGTTAAGAGCTCTA CAAAAGAGAAGGTTGTTAGAGTAGTTGTCTTGACTCTTAAAAACTTGCTGTCAAAAGGGACTTTGGGTGCTCAGATGGTTGACTTTCAGCTGCCACAAGT TGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCACTGAATTCCCTCGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGT TCTTTTGATAAGTACAAGCAAGAAGTTCTGCTTGGCCATCTGGATTGGTCTCCCATGCACAAAGATCGCATATTTTGGCGAGAAAATATTAACAACTTTG AAGAGAATGATTTCCAGATTCTGAGGGTTCTGATAACAATTTTGGACACATCTAGTGATCCAAGGACTCTGTCTGTTGCTTGCTTTGACCTTTCACAGTT CATTCAGCACCATCCTTCTGGGAAGCTCATCGTGGCGGACCTTAAAGCTAAGGAACGGGTAATGAAATTAATGAATCATGAGAATGCTGAGGTTACTAAA AACGCACTGCTCTGCATCCAACGACTTCTCTTAGGATCAAAGTATGCAAGCTTTTTGCAGGCTTAGTTCTTCAGCTATGTCATAAATGGTGGTATCATTT CTCTTGTGTACAAGGCTCGGCTCGGCTCATTCATTGTTTTAAGTGAGTAATTTATTGTCTGTCTATGACCATTAAGATTTCATTTTCAAGAAGTTTGATA TCAGAAATAAGTATCCTTGGTATTCTGTTATTTGAATAAATCAAGCTTTGTAACATTATAATACTCAAAGTTGTGTTTATAGCCATAGGTATGTTGAATT TGTTAGACATATAAAGTTATTGTCCTTGTGGGGATATGTCTCTTGGAAACTATGAGGTATTTGGTCTTGGTCATTGTTGTTTGTTCAGATCTCTTACTGG TTCAATTGCATTTGTGTTGGTGATGACATGCATGTCCACATTTTCATGAAAATAAAAAAGCATGCATTTTCTACCAAGTTTATTGGAG
• Tissue: pods
• Gene name: LI_gene_168866;
• Additional information: details;

Expression of Ll_transcript_484987

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 0
• PS2: 0.3
• PS3: 0.4
• PW1: 0.5
• PW2: 0.7
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484987

• Blastp: V-type proton ATPase subunit H from Arabidopsis with 78.1% of identity
• Blastx: V-type proton ATPase subunit H from Arabidopsis with 78.1% of identity
• Eggnog: subunit (H(COG5231)
• Kegg: Link to kegg annotations (AT3G42050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421164.1)
• Pfam: V-ATPase subunit H (PF03224.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;