Ll_transcript_485017

Id TrinityTRINITY_DN49381_c1_g3_i10
Name TranscriptLl_transcript_485017
SequenceGCAGAAATAAAGTCGTAGGGTGACGTGGGAATAAGTCGTTAGGACTTGGGAGGAAGATATACAACTGTTCTTACACTACTAATTTCTGTTTATCTGTTCT GTCTGCATTTTTCCTCACTTCTATCCACAAACCACCAAATCGCAGGGTTTCCAGTTCGATAACAATGGATCATGCTGAATTAACCACCGATCAGGTTCTG AAGAGGGACATCCCATGGGAGACCTACATGGCCACTAAGCTCATCTCTGGTACAAGCCTTCAGCTCTTGCGCCGTTACGATCACCAACCCGAAAGTCACA GAGCACAGTTGCTTGATGATGATGGTCCAGCTTATGTCCGGGTGTTTATTGAAGTTTTGCATAATATTTTTAAAGAAGATACTGTAGAGTATGTTTTGGC ACTGGTTGATGAAATGCTTACAGCAAACCCGAAAAGAGCAAGGCTGTTTCATCATAGTACCCTTGCTGTTGGAGATACTTATGAACCTTTCTTAAGATTG CTATGGAATGGAAATTGGTTCATAAAAGAGAAAAGTTGCAAGATCCTTGCTTTAATAGTTAGTGCCAGGCCAAAAAATCAGAATGGCATTGTTTCAAATG GAGAAGCGTCAGACTCAAAGAATCCGTTTACCGCTATCGATGATGTTTTGATAGGATTGGTAAAATGGCTTTGTGAACAGCTGAAGAAACCTTCTCATCC TAATCGTGGAGTCCCAACTGCTGTCAATTGCCTTTCAAGTATACTTAAGGAACCTATGGTTAGGTCTTCTTTTGTTCAAGCAGATGGAGTCAAGCTGCTT GTGCCATTGATTTCTCCAGCATCCACCCAACAGTCTATTCAGGTAAGTTTTCTGGATTTTATCTCTGATCATTTGAGTAATTAGATTTACCCTCAGTTGG GTACTATGAAATCTGCCATTAGGTGGCTTGTAATTGTGAAATATAAGTTATACTTTGTGGAGATTCAATAATCTATATTGCATCTGAAAGATGGCCGAAC TAAATATACTTGGTGCATCTTGCCAAATACTAAATGAAACTTCTTTCTTTCAAGAACAATGGTCGAGTGGGTTGTCCCCGGATTCCAGATTTGTTGGCTT GCGTATTAACTTATCAATAAAATATTACTGATAAAGATTGTTGGCTTTCATGGCACATTTGTAAGAAGTATGGGGAAATTAATCATGAAGTTTCTCTGTG ACGGCTTCTGTATGAAACATGTCTCTGCATATGGCTCTTATCCAACTAAATATACTTGGCGCATCTAGCCAAATACTAAATGAATCTTCTTTCTTTCAAG AATAATGGCTGAGTGCGTTTTCCCAGGATTCCAGATTTGTTGGCTTCTGTATTAACTTATCAATAAAATATTACTGATAAAGTTTGTTTGTTTTCATGGC ACATTTGTAAGGAATAGGGGGAAACTAATCATGAAGTTTCTCTGTAACAGCTTCTGTACGAAACATGCCTCTGCGTATGGCTCTTATCCTATTATGAGCC GGCAATTGAATATTTGGCTACTTCAAGGGCCCTTCCGCGACTGATTGATGTTGTTAAGAGCTCTACAAAAGAGAAGGTTGTTAGAGTAGTTGTCTTGACT CTTAAAAACTTGCTGTCAAAAGGGACTTTGGGTGCTCAGATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATG AGGACTTGTTGGAGGCACTGAATTCCCTCGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTGCTTGG CCATCTGGATTGGTCTCCCATGCACAAAGATCGCATATTTTGGCGAGAAAATATTAACAACTTTGAAGAGAATGATTTCCAGATTCTGAGGGTTCTGATA ACAATTTTGGACACATCTAGTGATCCAAGGACTCTGTCTGTTGCTTGCTTTGACCTTTCACAGTTCATTCAGCACCATCCTTCTGGGAAGCTCATCGTGG CGGACCTTAAAGCTAAGGAACGGGTAATGAAATTAATGAATCATGAGAATGCTGAGGTTACTAAAAACGCACTGCTCTGCATCCAACGACTTCTCTTAGG ATCAAAGTATGCAAGCTTTTTGCAGGCTTAGTTCTTCAGCTATGTCATAAATGGTGGTATCATTTCTCTTGTGTACAAGGCTCGGCTCGGCTCATTCATT GTTTTAAGTGAGTAATTTATTGTCTGTCTATGACCATTAAGATTTCATTTTCAAGAAGTTTGATATCAGAAATAAGTATCCTTGGTATTCTGTTATTTGA ATAAATCAAGCTTTGTAACATTATAATACTCAAAGTTGTGTTTATAGCCATAGGTATGTTGAATTTGTTAGACATATAAAGTTATTGTCCTTGTGGGGAT ATGTCTCTTGGAAACTATGAGGTATTTGGTCTTGGTCATTGTTGTTTGTTCAGATCTCTTACTGGTTCAATTGCATTTGTGTTGGTGATGACATGCATGT CCACATTTTCATGAAAATAAAAAAGCATGCATTTTCTACCAAGTTTATTGGAG BLAST
Tissuepods
Gene nameLI_gene_168866; 
Additional informationdetails; 

Expression of Ll_transcript_485017

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_485017
BlastpProbable V-type proton ATPase subunit H from Oryza sativa with 67.87% of identity
BlastxV-type proton ATPase subunit H from Arabidopsis with 81.94% of identity
Eggnogsubunit (H(COG5231)
KeggLink to kegg annotations (9272111)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019421164.1)
PfamV-ATPase subunit H (PF03224.13)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;