Ll_transcript_485011

• Id Trinity: TRINITY_DN49381_c1_g3_i8
• Name Transcript: Ll_transcript_485011
• Sequence: AAAAAAACCCATCGAATCGCGAGTGTGAAGAATCGGGTTCCAATTTCGATTACTATGGATCATGCTGAATTAACCACCGATCAGGTTCTGACGAGGGATA TTCCATGGGAGACATACATGTCAACCAAGCTCATCTCTGGAACAAGCCTGCAGCTCTTTCGCCGTTACGATCACCGGCCAGAAAGTGTCAGAGCACAGTT GCTCGATGATGATGGTCCGGCTTACGTCCAGGTGTTTATTCATGTTTTGCGTGATATTCATAAAGAAGATACTGTTGAGTATGTTTTGGCGCTAATTGAT GAAATGCTTTCAGCAAACCCGAAAAGAGCAAGGCTGTTTCATCATAGCACCCTTGCTGATGAAGATACATATGAACCATTCTTAAGATTGCTTTGGAAGG GAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATACTTAGTGCCAGGCCAAAAAATCAGAATGGAATTGTTTCAAATGGAGAAGCATC AAACTCAAAGAAGCCATTTTCCACTATCGATGATGCTTTGATAGGATTGGTAAAATGGCTTTGTGAACAGTTGAAGAAACCTTCTCACCCTAATCGTGGA GTCCCAACTGCTGTCAATTGCCTTTCAACTATACTTAAGGAACCTGTGGTTAGGTCTTCTTTTGTTCAAGCAGATGGAGTGAAGTTGCTTGTGCCATTGA TTTCTCCGGCATCCAACCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCTTATCTTATTATGAGCCGGCAATTGAATATTTGGC TACTTCAAGGGCCCTTCCGCGACTGATTGATGTTGTTAAGAGCTCTACAAAAGAGAAGGTTGTTAGAGTAGTTGTCTTGACTCTTAAAAACTTGCTGTCA AAAGGGACTTTGGGTGCTCAGATGGTTGACTTTCAGCTGCCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGCAC TGAATTCCCTCGAAGAAGGGCTTAAGGATAACATTAAGAAACTTAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTGCTTGGCCATCTGGATTGGTCTCC CATGCACAAAGATCGCATATTTTGGCGAGAAAATATTAACAACTTTGAAGAGAATGATTTCCAGATTCTGAGGGTTCTGATAACAATTTTGGACACATCT AGTGATCCAAGGACTCTGTCTGTTGCTTGCTTTGACCTTTCACAGTTCATTCAGCACCATCCTTCTGGGAAGCTCATCGTGGCGGACCTTAAAGCTAAGG AACGGGTAATGAAATTAATGAATCATGAGAATGCTGAGGTTACTAAAAACGCACTGCTCTGCATCCAACGACTTCTCTTAGGATCAAAGTATGCAAGCTT TTTGCAGGCTTAGTTCTTCAGCTATGTCATAAATGGTGGTATCATTTCTCTTGTGTACAAGGCTCGGCTCGGCTCATTCATTGTTTTAAGTGAGTAATTT ATTGTCTGTCTATGACCATTAAGATTTCATTTTCAAGAAGTTTGATATCAGAAATAAGTATCCTTGGTATTCTGTTATTTGAATAAATCAAGCTTTGTAA CATTATAATACTCAAAGTTGTGTTTATAGCCATAGGTATGTTGAATTTGTTAGACATATAAAGTTATTGTCCTTGTGGGGATATGTCTCTTGGAAACTAT GAGGTATTTGGTCTTGGTCATTGTTGTTTGTTCAGATCTCTTACTGGTTCAATTGCATTTGTGTTGGTGATGACATGCATGTCCACATTTTCATGAAAAT AAAAAAGCATGCATTTTCTACCAAGTTTATTGGAG
• Tissue: pods
• Gene name: LI_gene_168866;
• Additional information: details;

Expression of Ll_transcript_485011

FPKM

• PAB: 58.9
• PNAB: 84.2
• PS1: 58.6
• PS2: 51.7
• PS3: 60.6
• PW1: 71.3
• PW2: 65.3
• PW3: 48.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_485011

• Blastp: V-type proton ATPase subunit H from Arabidopsis with 78.1% of identity
• Blastx: V-type proton ATPase subunit H from Arabidopsis with 78.1% of identity
• Eggnog: subunit (H(COG5231)
• Kegg: Link to kegg annotations (AT3G42050)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421164.1)
• Pfam: V-ATPase subunit H (PF03224.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;