Id Trinity | TRINITY_DN49382_c0_g1_i6 |
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Name Transcript | Ll_transcript_484132 |
Sequence | GTTTTTTGGCACATAATTGATGGTGTGATGTTGATGAGTGAAGAAGCAAGTTGGTCAACTCAACACAGAGGGGGATATAGAAATAGAAATCTGAACAAAA ATCACTTCCCTCTTTTCAAATCTTGCTTTCTCTCTTTCTCAATTTTCATCACTATCTTCATGCATCAACATTAAAAATTCAAACTTTACAATAACATTGA TACAATGTTAGTGTTTTCTTCATGATTTGTGAAAGTATAAGGAAATAATAAACATGGCATGGAGAAATGGTTGTTATGATGAAGTGGGTCATTCAAAGCC TCTCTTTTTAACGATCTACATAGTTGTTATAATTGGCATCGTTGTTTCTTCTTTCTATATCTTCTCTGCAATTTATTCTAGTAACCCTGTTGCTTCTTCC TCTTTCTCTTCTATTTCATATGACCGTCCCCATCTTACGGATGCAACACTAAACATTTCTCAGTTAGCAACGGTGCATACTGTGCCCACTCCTTCCCTTG GGCCACAAAATGTATGGCCAAAGCCTATTTGGGATGTTCCACCTCACGATAAAAAGATGCCACCTTTGGAGGATTTCCGACTGACCAAAACACTGGTTCA GGAAAGGGTGAAAGATAATGTTATAATAGTAACCTTTGGTAACTATGCGTTCATGGATTTTATTCTTACTTGGGTTAAACAATTGACCGATATTGGACTC TCTAATCTTCTTGTTGGTGCAATGGACACTGAATTATTGGAGGCGCTGTATTGGAAAGGCGTACCGGTTTTTGACATGGGCAGCCATATGAGCGCAATAG ATGTTGGCTGGGGGTCTCCAACATTTCATAAAATGGGGAGAGAAAAAGTTATTCTGATAGACTCGATACTTCCTTATGGTTTCGAGCTGTTGATGTGTGA TACTGACATGGTTTGGTTGAAGGTGATCTTTATTTATTGAAGTAAAATTGTTTTGATTTTTAAGGTTGATTTATATATGCTTGCTTAGTTTTTGATGAAT GATATAAAAGGAGCACTAAAATTTGTATTGACTAGTATGTTTTCCTTTTCTCTACCATGTTCGTAAAAGAGATTTCGTTTAGTTTCTAGTACAAATTTCA ATAAATATTTAATTCACTAATCCTCACTAGGAAAATTTGTCACTATCTTGTTCTATATTTTCCTGTCATTTATTATGATTCGTATCTTCCATGTTCATTA TGTGAAGTCATATTTTGTGCTCATCATCTAGGATGTCTCGAATCTAATGATGTGATTGTTCCAAGATACATGTTCTTTCTAATACATGTGTTCAATTATG TAATCGTAAAACAGAATCCACTTCCGTATCTTGCTCGTTATCCTACAGCAGATGTTTTGACTTCAAGTGATCAAGTTATCCCAACAGTTGTTGATGATAG TCTAGAAATTTGGCAAGAAGTTAGTGGTGCCTTCAACATTGGAATCTTCCATTGGCGACCTACAGAGTCTGCGAAAAAATTGGCAAAGCAGTGGAAAGAA ATGCTACTAGCTGATGATAAGATTTGGGATCAGAACGGGTTTAATGATATCGTGCGCAGACAGATCGGGCCATCTGTTGACGATGACAGTGGACTTGTTT TTGCTTTTGATGGAAATCTGAAGCTGGGAATTTTGCCGGCAAGTATCTTCTGTAGTGGACATACATATTTTGTCCAGGCTATGTATCAACAACTAAGGTT GGAGCCATATGCAGTGCACACAACATTTCAATATGGAGCGACTGAAGGAAAGCGCCACCGGCTGCGAGAGGCCATGCTCTTCCGCGATCCATCAGAATAC TATAATCCTCCTGGGGGTTTCTTTTCATTCAAGCCGTACATTCCAAAACGCTTGTTGCTAAGTGGGGAGCATACTGTTGAATCACATTTTACCCTTATTA ATTACCAAATTAAACAGATTAGGACAGCATTGGCAATTGCCTCCCTTCTGAACAGAACACTGGTCATGCCTCCACTATGGTGCAGGATTGATAGGCTATG GTATCCCCATCCAGGTGTTTTAGAAGGCTCTATGACTCGACAACCTTTTCTCTGTCCTTTGGACCACGTATTTGAGGTGAATGTCATGTTGAAAAAACTC CCCGAAGAAGAGTTTGGTCCTGGCATAGATATTAGAGAGTACTCAATACTTGATAATCCATCTCTGCAGCCAGAGGTGAGAAATTCATGGCTTGATGTTA AGCTCTGCAAAGAAGGTAGACAGGATTGTGATGCATCAAATGATACCAGTGTTGGTGGATTACTTAAATTTCCGAAGCGAAGCAGTGAAGAAAAGTTTAT GAAAGTATTCTCATCATTCAAAGATGTTAAAGTCATCAAGTTCTCTTCGGTGCAAGATGCCTTCATCGGTTTCACTAACAAGGACCGGGAAGATAAATTC AGAAATCGTGTTAAGCGGTACGTGGGGATATGGTGTTGTGTGCCGGATCACGATCCTGGTCACATATACTATGACATGTACTGGGATGAGAAACCTGAAT GGAAAGCAATTCCCCCTCAAACTCCAGGGGATGATCATCCACCTTGGTGAGATTAACTTCAGCCTTATTTTTTTTTCCGGAACATTGACCGATGAGGAAA AACAAGACAAATCCAAAGTTGGTTCAGTTTGTAACTTAATTGTTCTGAGCAACATTGTATACTTACACATAAGTGAAAAAATATGTATCCATATTGAGCA TGTAAGTTATTATAGACATCATAAGTGTTGGTCCTTTTGTAGCAATTAAGAATGTTTTTGTCTTGTTTTAAGTTATCAATATAAATGAGGGTGGATACTT ATGTCTTTGGTGTTTTGGTTAATATTGAATTTGCATGTATGTGATTAGAATACTGAAGACATTCTTCTGTATCAATCTTGTCTTACACATTTTTATTTCA ATTTTCAATTGCTTGTGATTGTTCTTTGAA BLAST |
Tissue | pods |
Gene name | LI_gene_168872; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484132
Blastp | Arabinosyltransferase XEG113 from Arabidopsis with 76.89% of identity |
---|---|
Blastx | Arabinosyltransferase XEG113 from Arabidopsis with 76.89% of identity |
Eggnog | Nucleotide-diphospho-sugar transferase(ENOG410ZPDM) |
Kegg | Link to kegg annotations (AT2G35610) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019446952.1) |
Pfam | Nucleotide-diphospho-sugar transferase (PF03407.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |