| Id Trinity | TRINITY_DN49384_c6_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_484912 |
| Sequence | CAAGATTATGTGTAGAATAATAATAACATTTGTCCCATTAATGTCCTTAAGTTTCCCTTCATTCATATCCAGATCTTATCCAGTTCTATATATATAGCAT AGCACCAACCAAGCTCAAAGAGCATGGCTTCCAATATGATTCTAGTAGTCTCAAGTTTGGTTCTATCAGCTTTAGTTTCTCTCATACTTCAACTATTCTA CTTTTCACCCATTGACCCACTTCCACTTCACATACTACCTGCATCTTCATCCACAAACAACCATTTACAGAATGTGATAAAACTTGGAGAAGGGGATTTG AAGGATCCAGAAGATGTTTGTGTGGATAAAGAAGGCACTTTCTATACAGCAACAAGAGATGGTTGGATTAAGAGATTGCCCAGAAATGGAAATTGGGAGA ATTGGAAGCATATTCATAGTTCTACTTTGTTAGGAATCACAACAACAAAAGGAGGTATCATTGTATGTGATGCTATAAAGGGTTTGCTCAAGGTTACAGA AGATGGTGTCAGTATTCTTGTTTCACAAGTAAATGGTCTTCAGTTAAGTTTTGCAGATGATGTGATAGAAGCCTCTGATGGAAGTGTATATTTCAGTGTT GCTAGCACCAAATTTGATCTACACAATTGGCATCTGGATATGCTAGAAGCAAGACCTCATGGACAACTTCTTAAGTACAATCCAACATCAAATGAGATAG ATATTGTCTTAGATAATCTTGCCTTTGCCAATGGTGTTGCACTCTCCAAGGATGAAGATTATATTGTTATCTGTGAAACTTGGAAATTTAGGTGTCTGAG GTATTGGCTAAAAGGAATAAACAAAGACAAAACAGACATTTTCATTGAAAATCTCCCTGGTGGACCTGATAATATTAATCTTGCTCCTGATGGGTCTTTC TGGATTGCTCTACTTCAGATTTCTACCAAAGGATTGGAGTTTGTGCACACTTCCAAGGTAGCCAAGCTCTTGCTAGCTTCATCACCAAGGCTATATAACT TAATCAATGGTGCAAAGCAGAAGGCAACAGTGGTGAAGGTGGCAACTGATGGTAAAATAATACAGAGGTTTGATGATGATAATGGAAAAGTGATTAGATT TGTCACTTCAGCTTTGGAGTTTGAGGACCATCTTTACCTTGGTAGTCTCAGTTCTAACTTTGTTGGAAAATTACCACTGCACAATACTAGTAACTAGCAA GTTCAGCTTGCTGCCACTGAATAAGAGTGTATCATCAAACAATGTAAGCATCTTTTGATTTGTATGATTCAGACACAACATATATAATCCAAGATTGTCC CTGTTATGCAAATTTGATGTTTTTTTTTTAATTTATGCAATTTTCTTGTTCTTCTTTTTAATTTATTGTGACATGTTAGTTGGATTAGTATTAGAGTGTA ATATGTATGTACTGTCATTGTAAAAATTTACACACAGTAAGTACACCATCCACCATTCATTTGTATTATTTTTTCAAAGAGTCAACGATAATAAAGCATG AATGGTGGATGATACAATGACAACGTATAAAACTCATACAGAATACAGAAAGTGCATTCATTTGTATTATTTTTTCAAAGAGTCAACGATAATAAAGCAT GAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_168886; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484912
| Blastp | Protein STRICTOSIDINE SYNTHASE-LIKE 4 from Arabidopsis with 31.02% of identity |
|---|---|
| Blastx | Protein STRICTOSIDINE SYNTHASE-LIKE 4 from Arabidopsis with 31.83% of identity |
| Eggnog | SMP-30 gluconolaconase LRE domain protein(COG3386) |
| Kegg | Link to kegg annotations (AT3G51420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414226.1) |
| Pfam | SMP-30/Gluconolaconase/LRE-like region (PF08450.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |