| Id Trinity | TRINITY_DN49385_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_484615 |
| Sequence | TTTGTGTTTTCTTCTCAAGTGATTAGTGGTTGAGATTTTGGGAACACTTTGTCCTGCTGTATCCCTCTTTCTCCCCACAACTTCATTTTAAACCTCAAAT TTTGTCATCACTTCTCATTATAATAGCCATCATCATAACCCTCTCTACTTCCATCGTCATAATAATCACTCTCTTTCTTCCTTCAAATCATTCCCCCTTT ACCTTGTTTTTTGTTTTATTTTGTTTCATTTCATTTCCCATTTTATTCCAACAACACATCTTCTAAAGAGTGCTTTAACCTTGTTCCCAAAAAACCCTAA TCCTCACCAACCTCTTTCTATAGAGAAAAACATGGACTTGACCCCAACCATATGCAAAGATACTCAAACCCCACCACTAACCCAACCCATCAATCTTAAC CCACCCAAGTCCTTATCTTTTACCAATGGGACACTCAAACCCCATTCCTCCACCACCACCGCTAGCGCCACCGTCCCTCCGCCGTCATCCATAGTGGTTT CTTACAAAGAATGTCTTAAAAACCATGCTGCCAGCATAGGTGGCCATGCAATTGACGGCTGTGGCGAATTCATGGCTTCTTCCACCGCTATCCCCACCGA CCCTCGCTCCCTTATATGTGCTGCTTGTGGCTGCCACCGTAACTTCCACCGCCGTGACCCTCAAGAACCACAACCACCACCACCCACTTTCCTCACTTGC TTCTACTCCACCACCCCTTCTTCAGTAACACCTACAGCTCCTCCACCACCACCACAACTCCCCCACCGTGCCATGAGCCAAAGCACAAGCCCGAGTCTCA GTTCTAGCCCAAGTCATAGTCCTAGCCCCATTTCATCAACCCCTTCATCTCCACCACCACTTTCTCACGTGCCACCTTCTTCATATGCAGCACCCCACAT GCTCCTAGCACTTGGAAACAACAACAATGCTTATTCCATTGATTATCAAAACAGAAACTTTCACTCTTCTTCATTGGTTCTTAAAACTGAGACCATTAAC CTGAGTGGGAAGAAGAGGTATAGAACCAAGTTCAGCCTGGAGCAGAAGGAGAAAATGTTTAGGTTTTCTGAGAAATTGGGTTGGAGAATGCAGAAAGGTG ATGATAGATCTGTTCAAGAGTTTTGCAGTGAGATTGGTGTCCCTAGAGGAGTCTTCAAGGTTTGGATGCATAACAACAAGAACACTTTAAGGAAGAAATC AGAAAGTGCTCCACAAATTGAAAAGACTAATAGTGATAAAGAAGTTGGCAATGGTGATGGTATTAACAACTCTTTCAACATTAATTGCAGCAACAACAAT GACATTCACAAAAATGAAGATAATTGTGTTGATGTTCATGTTTCTTTTAATGGCTTGCCATCTTAATCTTCATCTTTCAAGAAACATAATTAGATAAACG GTAGTAGTAATTTGGCCATATTATCAATGATCATTTTTGTTCATTGCCATCTTTTTATAATCACCTATGGCTATAGGAAAATCCACTTGTTTTAGTTACT TTGAAGTTAATATCCTATGATGTTTATTTATGTTCATAGCCTCTGGGATTATTTGTACCACTAAGACATGTTTCATGATTTCATTCTCTTGCTGATAGTT CTGATTGCTTTCACATTTTTCCTGTCCATTAGAACATTTGTGTTTGAAGTATCTTTTTGTTTTATTTTGAAACGTTAATATTAATCATTCATCAGCTTTT GTTAGAAGCGTGCATCTCCCAAAATGCCCATGCTTGCTTGTCCAACATAGTGAGCCTTATCAATTCAAGGAATGTAATCTATCTGCACTTTTGTCCTTAT TCATTTGTGGAGATCTACCACTTTTAAAAGATTTTATGTTGGAGATAATGCTATTGATGAGTTTGGTGATACAATGCATGATTCATACCTCTGAATTTAA TCTTCCTATTAATTTCTTTTATGAATTATCATGTAAGGGCAAGGAATGTAATCTATCTGCAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_168904; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_484615
| Blastp | Zinc-finger homeodomain protein 9 from Arabidopsis with 38.02% of identity |
|---|---|
| Blastx | Zinc-finger homeodomain protein 8 from Arabidopsis with 52% of identity |
| Eggnog | homeobox protein(ENOG410YKTX) |
| Kegg | Link to kegg annotations (AT3G28920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433688.1) |
| Pfam | ZF-HD protein dimerisation region (PF04770.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |