Ll_transcript_484621

• Id Trinity: TRINITY_DN49385_c3_g1_i7
• Name Transcript: Ll_transcript_484621
• Sequence: TTTGTGTTTTCTTCTCAAGTGATTAGTGGTTGAGATTTTGGGAACACTTTGTCCTGCTGTATCCCTCTTTCTCCCCACAACTTCATTTTAAACCTCAAAT TTTGTCATCACTTCTCATTATAACAATCATCATCAACTTCTCTACTTGCATAATCATCATAACCCCTCTTTCTTCTTCCAAACCATTCCCAATTTACCTT CTTTTTTGTTTTATTTCCCCTTTTATGCACACAACCTTCTTCTAAAGATTGCTTCAAACTTGTTCCAAAAACCCTAATCCCCCAACATGGACTTGACCCC GACCACAGGCACAGATACTCAAACCCCACCACCAACCCAACCCATCAAGCTTAACCCATCAAAGTCCTTATCTTTCACCAACGGCACACTCAAGCCCCAC ACCACCGTCGTCCCTCCGCCGTCACAACCGCCCTACATGGTGGTTTCTTACAAAGAATGTCTCAAAAACCATGCTGCCAGCATAGGAGGCCATGCACTTG ATGGCTGTGGCGAATTCATGCCTTCCTCCACCACCAACCCCACCGACCCTCGGTCCCTCAAATGTGCTGCTTGTGGCTGCCACCGTAACTTCCACCGCCG TGACCCTCAAGAACATCATCAACAACAACAACCACCGCAACCCAATTTCCTCACTTGCTTCTACTCCACCACCCCTTCTTCAGTCACACCCACAGCCCCA CCACCACAACCACCACCGCCACAACTCCCCCACCGTGCCATGAGCCAAAGCACAAGCCCAAGTCTCAGCTCTAGCCCAAGCCACAGTCATAGCCCCATGT CATCAACCCCTTCATCGCCACCACCACTCTCTCACGTGCCACCTTCATATTCAGCACCCCACATGCTCTTATCACTTGGAAACAACAACAATGCTTATTC TATTGACCATCAAAACAGAAACTTTCACTCTTCCTCATTGGTGATGAGAACTGAAACTATTAACCTGAGTGGTAAGAAGAGGTACAGAACCAAGTTCAGC CAGGAGCAGAAGGAGAAGATGTTTAGCTTCTCTGAGAAATTGGGTTGGAGAATGCAAAAGAGTGATGATGGATCTGTTCAAGAATTCTGCAATGACATTG GTGTCCCTAGAGGGGTCTTCAAAGTTTGGATGCATAACAACAAGAACACTCTAAGGAAGAAATCAGAAGTGGGAAATGATGGTACTCCTCCTCAGATTGA AAAGACTAATGTCAATGGTGATGATATTAACAACTCTTTTAACATTAATAGCAGCAGCAACAATGACATTCACAAAAATGAAGATAACTGTGTTGATGTT CATGTTTCTTTTAATGGCTTGCCATCTTAATCTTCATCTTTCAAGAAACATAATTAGATAAACGGTAGTAGTAATTTGGCCATATTATCAATGATCATTT TTGTTCATTGCCATCTTTTTATAATCACCTATGGCTATAGGAAAATCCACTTGTTTTAGTTACTTTGAAGTTAATATCCTATGATGTTTATTTATGTTCA TAGCCTCTGGGATTATTTGTACCACTAAGACATGTTTCATGATTTCATTCTCTTGCTGATAGTTCTGATTGCTTTCACATTTTTCCTGTCCATTAGAACA TTTGTGTTTGAAGTATCTTTTTGTTTTATTTTGAAACGTTAATATTAATCATTCATCAGCTTTTGTTAGAAGCGTGCATCTCCCAAAATGCCCATGCTTG CTTGTCCAACATAGTGAGCCTTATCAATTCAAGGAATGTAATCTATCTGCACTTTTGTCCTTATTCATTTGTGGAGATCTACCACTTTTAAAAGATTTTA TGTTGGAGATAATGCTATTGATGAGTTTGGTGATACAATGCATGATTCATACCTCTGAATTTAATCTTCCTATTAATTTCTTTTATGAATTATCATGTAA GGGCAAGGAATGTAATCTATCTGCAC
• Tissue: pods
• Gene name: LI_gene_168904;
• Additional information: details;

Expression of Ll_transcript_484621

FPKM

• PAB: 5
• PNAB: 2.1
• PS1: 0.8
• PS2: 7.5
• PS3: 1.2
• PW1: 1.6
• PW2: 0.4
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484621

• Blastp: Zinc-finger homeodomain protein 11 from Arabidopsis with 47.11% of identity
• Blastx: Zinc-finger homeodomain protein 8 from Arabidopsis with 59.77% of identity
• Eggnog: homeobox protein(ENOG410YKTX)
• Kegg: Link to kegg annotations (AT1G69600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445943.1)
• Pfam: ZF-HD protein dimerisation region (PF04770.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;