| Id Trinity | TRINITY_DN49386_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_483387 |
| Sequence | CCTCCTCACAAAAAATCTCATCTTTCTCACTTCAACATTCAAACCCACTTTTTCTCTTACTCAGTTCTCCTTCTCTATTTCTCCAAATTTCATTTCAATT ATTTAATCAAATTCTTATACCTTATTTCCATTTCCAAATGCTTCATTCTATTTCTTAAATTTCCCTTAATAAAAAATAATCCTTAATTTTTCCGAAACCT AGGGCATGGTCGGTGGCGGTGGCAACGGCGATGATCACCACCGCAAAATGTTCTGGCGCTCCGCCTCTTGGTCAGCCTCCCGCACCGCCGCGGCCGGAAG CACCACCACCACCAATAACCCTTCCGGCAAGGTGGGTAATGATTTCTCCGATCCCAATCCCGGCGACGGCCAGAGTCGACGGTTCCTTCTGCCGCCGCTG ACGCCTCGGTCGCAGCAGCAAAGCTCCAAGGGCAGGTCGTTCCTGCCGCCGCTCTCCATCGCTCCCCGGAGCATGGACGAGTGGCCGAAGGCGAGCTCGG ACGATATCGGGGAGTGGCTGCAGCTCCCCACCACACCTAGTGGTGGTGGTGGGAGAGGTAATAATAGTAATTGCAATAATGGTGAAAGATTGAAACTTGA TTTGTCTTCAATTCAGCAAAATCATGATAATGGTAATTATAGTAATTGTAACAATAGTGTTGGACTTGTGAAGAGAGATAAAATTGCATCTTTTGATAAG GAATGTTCAAAAGTTGCTGATCATGTTTACCTTGGTGGTGATGCTGTTGCTAAAGATAGAGATATTTTGAAGCAAAATGGAATCACTCATGTTTTGAATT GTGTTGGTTTTGTTTGTCCGGAGTACTTTAAAGCCGATTTTACGTATAGGACATTGTGGCTTCAGGATAGTCCTTCCGAGGATATTACTAGTATTCTCTA TGATGTTTTTGATTACTTTGAGGATGTTAGGGAGCAAGGTGGGCGTGTCCTTGTTCATTGCTGCCGAGGTGTTTCGAGATCAACGTCGTTGGTGATTGCA TATATCATGTGGAGGGAGAGTCAGAGCTTTGAAGATGCTTTTCAGTATGTGAAGAATGCAAGAGGTGTCACCAATCCAAACATGGGTTTTGCTAGTCAAC TCTTTCAGTGTCAGAAAAGGGTACATGCTATGCCTGCTAGTCCTAAATCTATTCTTAGAATGTATAGAATGGCTCCTCATTCACCTTATGACCCTCTTCA TTTGGTTCCCAAAATGGTGAACCAGCCATGTGCACAAACACTTGATTGTCGTGGGGCTTTTATTATCCATGTTCCTTCTGCTATATATGTATGGACTGGT AAGAATTGTAATTGTGTCATGTCTTGTAATGCAAAGTCAGCAGCCGATCAGGTCATACGTTATGAGAGGGCCAGAGGTCCAGTTCTTATGATCCATGAAG ATGAGGAGCCACCGGATTTTTGGATTGCTCTTTCCAATGAGCAATTGTTATCAGGTAATTGTGATAAGGTTGAGGTCAAGAAGGATACAGCATTGGCTTC TTCTGAAAGAATGGAGATTGATGATGCAGTCGATAATTGGATTCGTCCAAGGAAAGTGGATGAATATGATTTGGATTTTGAGATTTTTCACAAGGCACTT GCTGGTGGTGTTGTTCCACCTTTTTCTGTATCTAATGATGAATCAGAAACTTGCCTTCCCGCTAGAGAAAACGGTTGGGGAAGATTGAGGAGAAAGCTTG CTAGCGGTCTCATGAAAGGATTGTTCCCATCCTGCAAAAGTACAAACTCATCCAAAGGCGAATCGTGTGCAATCATGGAAGAAGAAGATGAAAAACAACA CTCTGTTGTTGATCCTTCATCGCCATCATCAAACCACCCTTGTGGTTCACGGGATTTGTTTGAGTGTTTTCCAGATAACAGCTCAGACAGGGTAAAAGAT ACACTTGAAGTCATGGACCACTTTGTTCCTAGCGTTGATTCATCACTGCCACCATCTCCCGGAGGAATGTCAGATTCTTATGCTTGTTTTCTAAGCAATA GCCCAAAACTCAGTTCCAAGTCGCTGACGCTTTCACCTTCAAGTTCTGATTATGACAGACAAATTAAATTTTCTGCTTCATCAAAAAACTGATATTCTCG GCTGTCATCACCTTCTAGCCTGAAAGCAACTGAAGCCCTTTATGGTAAAGATGCATCTTTCTCAAATGGTTTCTTTTCGCTTCAGAAAGAAACCGTCTAT TCGCGTTCAGAGGGATTTTCGGATAATAACACATTGGGAGGAGCAAAGTTCTATTCTCCAAGTAAAGGACCTTCTTCACCTTCCATCGCAGAGCACAGCG GAGCAATCTGCCACCTTGGTCAATGAATCACCCCATGCCCCAAGGTCTTGGTTTGATCGCAGTCATTCTCTTTGCCCAACTTGGATGATAATTTGAAAAG GATGTTATTTGCAATCAATCTGATCAAGACAGTGGAAAACGGCCGATTCTGATATCATCCCTACAGGTGTTGAAAGTGAGAATGATGGCAGGGATCATTG TAGTATAGTATTGTGTCATGTAATATGTTGGTTATGCTTTTAGTACAAGTACAAGAGATGTGACAATAGTTCAGTTTCTTCATTTCTACCCTACAGTTGA ACCCAATGATATATTTTTGGAGGTGAATTTGCATAATCTAGGCCTAATATTGATGCAAGTCTGCTAGGAGTACCATAGGCTGAGTAATAACTACAGAGAT ACAAGCTGTTCACTGATAGCATCTGAAGTACATGACAATGATTGAACATTAGTGAATATAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_168906; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_483387
| Blastp | Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 58.08% of identity |
|---|---|
| Blastx | Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 59.65% of identity |
| Eggnog | dual specificity phosphatase(COG2453) |
| Kegg | Link to kegg annotations (AT3G55270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461960.1) |
| Pfam | Dual specificity phosphatase, catalytic domain (PF00782.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |