Ll_transcript_483391

• Id Trinity: TRINITY_DN49386_c0_g1_i15
• Name Transcript: Ll_transcript_483391
• Sequence: GGAACTTCTAAAACCAAACCATTCTATTCTTTCTTGTTCCTTCTTCTCTTCACAAACACTGTTAGTAACATTATTATTCTCTTCACTGCGTTAAACCTTG TCGCAAAAAATTTTCATGTTTCTCACCCTTTTGTTCTTGTACTACTGATCCATCACGTTGTTTCTTTGGCCTGAAAATTCTTATTTGCATGTTTGAATTT TCTTCTTTTCTCTTTATAAACATTTCATTTATACGTACCAAAGAATGAGTCAGGGTCAAGGGTTTTAGTTGGAGAGAGAGAGAGAGAAAAAAAAATGAGA TATAATGCAATACCTACCATAACCATTTTTTCTTTTTTCTCTGATACACTTTAGCTTATAGAAAGTTTGGGACAGATTCTTTTGTTGGGTTTTGATTAAA GTTTCTATCTTTATCATTTCCCTAGCTGGTTACTTTTGCTGTCTTTGTGTTGTTTTTTCAATATGTTAGGTGAAGAAGAGAGTAAGGACCTTTCCGGGGG TCACCTGATACCACATTCCAGGCCAATTTCATGGACTGATCGAGCTCCGGTGAACCGAAAGCCGACGAATAGGCCAAGATCATTGATGCCGCCATTGCAG CCTCTTTGTATTAATAAACGCTATGTTGCAGAATGGCCAAGTGCTGGATCTGATGACCTTGGAGTTTGGCCACTTCCTCAGACTCCAAGAGGGTCAATTA GACTCACTGAACAAGGTTCTATGAAGGAGTTTCAGTTCAAGAGGGAGAAGCTGGCCTTCTATGACAAAGAGTGTTCCAGAATTGCTGACCATGTGTACCT TGGGAGTGACACAGTTGCAAAGAACCATGAGCTCTTGAGGCAGAATGGGATCACTCATGTTCTTAACTGTGTTGGTTTTGTTTGCCCTGAATATTTCAAG AGTGATTTTGTGTATAAGACTCTTTGGTTGCAGGATAGTCCAACTGAGGACATCACTAGTATTCTGTATGATGTTTTTGATTACTTTGAGGATGTTAGGG AGCAAGGTGGGCGTGTCCTTGTTCATTGCTGCCAAGGGGTTTCGAGATCAACGTCGTTGGTGATTGCATATATCATGTGGAGGGAGAGTCAGAGCTTTGA AGATGCTTTTCAGTATGTGAAGAATGCAAGAGGTGTCACCAATCCAAACATGGGTTTTGCTTGTCAATTGCTTCAGTGTCAGAAAAGGGTACATGCTATG CCTGCTAGTCCTAATTCTATTCTTAGGATGTATAGAGTTGCTCCTCATTCACCTTATGATCCTCTTCACTTGGTCCCTAAGATGGTTAACCAGCCATGTT CCCAAGCACTTGATTCTCGGGGCGCTTTTATTGTCCATGTTCCTTCTGCTATATATGTTTGGACTGGTAAGAATTGTAACTGTGTTATGTCTTGTAATGC AAAATCGGCAGCTGATCAGGTTATACGTTATGAGAGGGCGAAAGGTCCAGTTATTATGATCCATGAGGATGAGGAGCCACCAGATTTTTGGATTGCTCTT TCCAATGAGCAATTATTAACAGGTACTTGTGATAAGGCAGAGGTCGAGAAGGATGCAGCATTGGCTTCTTCTGAAAGAATGGAGATTGATGATGCAAATG ATAAACGGATTCGTCCAAGGAAAGTCACTGACTATGATTTAGATTTTGAGATTTTTCACAAGGCACTTGCTGGTGGTGTTGTTCCACCTTTTTCTGTGTC TAATGCTGAATCAGAAACTTGCCTTCCCGCTAGAGAACACGGTTGGGGGAGATTGAGGAGGAAGCTTGCTAGCGGTCTCATGAAAGGACTGTTCACAACC TGCAAAAACACAACCTCGTCCAAAGATGAATCGTCTGTTATCATGGAAGAAGAAGAAAAACAACACTCTATTGTTGATCTTTCATCACCATCATCAAACC ATCCTTGTGGTTCACCGGATTCATTTGAATGTTTTCCGGATAACAGCTCAGACAGGGCAAAAGATACACTTGAAGTATTGGACCACTTTGTTCCTAGTGT TGATTCATCCCTGCCACCATCTCCTGGAGGAATGTCGGATTCCTTTGCTTGTTTCCTAAGCAACAGCCCAAAACTCAGTTCCAAGTCACCAACGCTTTCA CCTTCAAGTTCTGATTATGCTAGTTCATTTACATTTTCACCTTCATCAACAAACTGGTCTTCTCGTCTGCCATCACCTTCTAGCCTGGAATCAACTGAAG CCTTTTATGGCAAAGATGCATCTTTCTCAGATGGTTTCTTTTCACTTCAGAAAGAAGCCATCTCTTCACCTTCGGGGGCATTTTCAGCTAATCACACATT TGAAGGAGCAAACTTCTATTTTCCGAGCAAAGGATCTTCGCCTTCCATTGCAGAGCGCCGAGGGAGTAATCTGCCACCTCGCATGGTGCTACCATCCGTC AATGAATCACCCCGTGCCCACAAGGTCTTGGTAAGATCACAGTCATTCTCTTTGCCTGACTTGGATGATAATTTGAATAATGATGTTAGTTTCAAACAAT CTGACCAAGACGGTGGAAAATGGCTAAAGACAGATGCTGATATTATTCCTATAGCTGTTGAAAATGAGAGCAATGACATAGGATCATTGTAGGATACTGT GGTGTCATGTAATATGATGATCATGCTTAAAGTAAAAGAGATTAAGAGAAACTTGACACGATGACAATAGTTCAGTTTCTTCCTTTATAGCCTATGGTTG GGACCAAAATGATCTATTTTTGGAGGTGAATTTGCATAAGGTAGTCTGAATATTGCTGCATGTCTGCAAGGTGTACAATAGGCTGAGTAATAACTACACA TAATAACATGCAGGCCTGTGCACTAATAGCATCTTCAGTACATAACAATGATTAAACTTTAGTGAATATAAAGACTATTTCTCTTTTCTCTTGTTTTTTT CTTGTTCTTGTTCATTGAAGCCATCAGGACAGTGTGAAAGTTGCTATTGTTTTTGCATGAAAACCTATCAAATTGGTGCAAAATGGCTACCTTCGTAGGA AATCACAAAGGAGATATCATAGGATAGCTGACATTAACTTTGTTAGTAATGTTTCCATCATCTTTTACTAGTATATACTGTTTCCATTAATAAATTAAAA TGATGTTTCAGTCTTTCATAAGCAACATTTCATTGCCAGAAGGTTTCTTCTGCTTACACGGTTTATATGAATAAAATCAGCTAAATTTTAC
• Tissue: pods
• Gene name: LI_gene_168906;
• Additional information: details;

Expression of Ll_transcript_483391

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.5
• PS2: 0.7
• PS3: 1.3
• PW1: 0.1
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_483391

• Blastp: Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 55.15% of identity
• Blastx: Protein-tyrosine-phosphatase MKP1 from Arabidopsis with 55.15% of identity
• Eggnog: dual specificity phosphatase(COG2453)
• Kegg: Link to kegg annotations (AT3G55270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464013.1)
• Pfam: Dual specificity phosphatase, catalytic domain (PF00782.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;