Ll_transcript_484220

• Id Trinity: TRINITY_DN49388_c7_g1_i3
• Name Transcript: Ll_transcript_484220
• Sequence: GAGTAAAGAGTAATAAAGTATCTCCTCCTGATAGAAAGAGATGATAAGAAATAACGAGGAAAGGTGTGGATGCACATAGAAGATGAAAGAAAGACGTACA TATGATAACCGCAGTTGCTACCCATGTTTATGCCACTCACTACCTGTACACACATATATTATGATATTGTTTTAGGAATATATTAATTAATTAATTAATG TTATTGAAAAGAGGAGAGGAGGAGGATACGAGATGAGGAAGAGAAGGAAAGAGTGAATTGGAAATTCCAAGAGAAGTGCAGTCAGCCGGAGTCCCAGAAA TAGCGTAGGCGGCAGTGGTTCCATCAATCTCAACTTTCTTGGCACTCACTGGATGGCGCCATGTAATGCTGTGACTAACAGCTGACTTCTCACTGCCATA CAAAACCAATATCAAATCAAATCAAACCAGATCAGATCAATTCAATTCAATTCAATTCAAATTCATATACCTATCAGGGGCGCACACTTGTATATTGTAC AGATTCGTGGATACCAAAACATTAACCAGAGCTCTAAGACCAGCTGCATCTATTCCATCGTCATTTGTTATCATGATCGTCGCTCTCTTCTCTGACTCCA TCTTTTATTATTATTATTATCCAACAAAACAACTTCTACCATTCTTTATTATAAAACAAAATCAAATCAAACTAAATTACATTATCACCCCTCAGATTTA ACTTAATTAATTAAAAAACACTTCTAAGTTTTAGTTTAATTATATCTTCTCTCTGCCGTACAATTACATTGATACAGAAATGGGTTCAAGGTTTGTGTTC ACCAATGGCCACACCTTGCAATTGGATGCTCCTCCAATCAAACATTTCCTTCAAGCCAATCCAGGTGCTTACACAACATCACGAACTCACAACAATGCTT CATGCCTCTTATTTTGGGAGAGACACATCAAGAGACTCTCACACTCTATCCATATTCTATCTATTTTGGCTCCACGACTTCTTTTTAAAACTAATCAATA CCATTCTCCAATTGTACTACCATCCAACGCATTGCAGCTGCTGATCAATGATTCAATGCGCAAGGTGTTGCCAACAGCATTGAAAGAGAGAAGTGATGGT GAGGAACTAGCCATTACAACTCTTGTTAATGCTAGTTTGGATGGAGTTAATGCATGTCAGGATGTGGATGAAGAAAGTTTGAGTCAAATTCTTGATGTGC ATGTGCATATTGAGTCTTATGTTCCTCTTGCATTTGGTACTCCCCCAAATGGTGCACATTTGGCTCTCGCAGGCTACGGGAGGCCTCTTCCCACTGCAAA ATATTCAGATTGGGTCAGGATCAGGAAGACTCTGGAAAAGCTAAGGCCTCCTTCAGTGACAGAACTTTTACTGTCTAATGATGGTGATCAGATACTTGAA GGCTGTGTAACAAATTTTTTCGTTGTTTGCCGCAAGGATCTGGATTCTGATGTTGGGAAAGCTCTGCCTGATTATGGAAATGAATATCCTTTTGAAGTAC GTACAGCACCTATCAGTGATGGTGTTCTTCCAGGAATAATACGCCAAGTAGTGATTGAAGTATGCAGAAGTGAGGGAATCCCATGTCGTGAAATTGCTCC TTCATGGTCAGAGCATGAAATCTGGGAGGAGGCATTCATCACAAGTAGCTTGAGGCTTGTGCAGCATGTAGATAGCATTCAAGTTCCAACAGAATGGCAA TCAGCCCTTTCTAAAACATGGAAGGATATATCATGGACAAAGAAGCAATTTCAGGGGGTGCCTGGGATGATCACAACTTTAATCCAGGAAAAGATTCTGG AGAAAGCAATTCTGGAAGGGTACCCAATAAGTGACATGCGTGCGTCATGAAAATCCTACTCTGCATTACTCATATGCTGCTGGGATGAAGGCGGCATGAT TGATCTTCTCTTTCTCCCTTTCTTCAATTCAACCATATACATTATTCTAAAGCACAGCACGGATTCGTCGAACACCCTCACATATCGGTATCCGACACGG ATATACTCAGATTCGTGAAAGATATGTACTCGTAGAGTATCCAAAAATAAAATAAAAAATAACAAAGATGAAGATAAGTATCTGATCCATTTTCAATAAA AAAATAACACACGATATATGTTTTATTAAAGCCAAGCAGCATCCCAATAAATCGAGTAAAAACTAATTTATTTAAGTAATTTTATGAATTATTCTACTGT ATTTTCTGGTACATGGAATTTTGAAGGACG
• Tissue: pods
• Gene name: LI_gene_168925;
• Additional information: details;

Expression of Ll_transcript_484220

FPKM

• PAB: 0.3
• PNAB: 1.7
• PS1: 1.2
• PS2: 1.1
• PS3: 1.5
• PW1: 1.2
• PW2: 1.1
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484220

• Blastp: -
• Blastx: 5'-nucleotidase SurE from Thermoanaerobacter with 33.02% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452854.1)
• Pfam: Amino-transferase class IV (PF01063.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;