Ll_transcript_484224

• Id Trinity: TRINITY_DN49388_c7_g3_i3
• Name Transcript: Ll_transcript_484224
• Sequence: CTTTATGAGTGGGTTTGAAATGAAAGAAGACAGAGAGGAAGATCTATATCTAAGAAAGATCCGATAGCACGTTCATTCATAGTAGGTAGTGGTTTCAGAC GCATTTTCCACTGGGTGCACATCTGTAACATAATGTGTGTTCATGTGCCATTCATTTTCATTTGTTCAAAAAAAAATATTTAAGTTAAAAAATTAATAAT TAATTATTTTCTCATTGATCATAAATTGTGACACGTGGAGTGATACACTTCTGTGGGATAGATGTTCATCATTTACAGTTGAAATGAATGTGAACGTGAA GTTATTGTTATTTATTACACTGAAATGAATGTGATGCTATTATTACACTGAAAAGAGAGAGAGAGAGGGAGAGAGATAGAGAGAGAGATGGAAGAGTCGA AGAAGAAAGCAACGATTCTGATAACAAACGACGATGGAATAAACGCTCCTGGTTTAAGAGCATTGGTTGAGAGTCTGGCGGAAACGAATGAATTCAACAT TTATGTAATCGCTCCAGATAGTGAGAAGTCATGTATTGCTCACTGCATTACTTGGCTTCACCCTCTACATCTCAACCTTACTCATATTCATGGAACCATC TCTTCCTTTTCCGTTTCTGGTTCTCCCGCTGATTGTACTTCCCTCGGAATTTCCAAAACACTCTTTCCCACTGTTCCTGATCTGGTATTTATATCCTTCT TTACTTTCTCCATCCAACACCACATTCTTCTTACTTCTTTTTCATTTTCACTTTACACAGGTTATCAGTGGCATAAACAACGGTGACAACACCGGCTATG ACATTTTTTACTCAGGCACTGTAGCTGGAGCTCGTGAGGCCTTCTTCAATGATATACCTTCTATGTCCATTTCTTATTACCGCCCTGATTGGGCTGAGGG TAATAGTAAGATACATGACTTCATCCTTGCTGCACAAGTATGCGTGCCTATCATACGTGCTGTTCTGGTTGAGATAAAGAACCAAAGCTACCCTCGAAGA TGTTTTTTGAATATAAATGTGCCAAACAATGTTGCAAATCATAAGGGTTATAAGCTGACCAAGCAGGGTAAAAGTATTTGCAAAATGGGATGGAAGCAAG TCACCTCTGAGACAGAAGGACAGAGAATGTCATCTAATAGGACCAATATAAATACAGAACCACCTAAAAAAAATGGCACAGTATCATCTGTATCTCCAGA ACATCTTTTGTTTCTGAGAGAGGTAATAGGTTATACACTTGATGATGATGATGGTACCGAGTACAAATCTTTGCAAGAAGGATATATTACTGTGACTCCT CTTGCTGCTCTTTCTGATGCGGAGTTCAATTGTCAGACCTTTTTTAAGGAATGGCTAGGAAGTGTCTCTGAACTCTCCTCTTCATCGGCATTATAATGTT GTAAGAACTATCATGTGTTTGTAGCTTATATGATAGCTTTAGTAATATTTTCAACAAATGTAGCTTCCTTTCTAATTTGTGGTGAAAGTGACTCTTGATA GATGAACGGAATATTTAAGCAAGGTTTTAAATAAAATAGTGTGTTGTAATGACATTACAGAGCCAAGTTATTATAGTGAGGGTGTAATTGACATAGTATT GGTTGCTATTGTGTGATTTTGAGCCATGTACCCCATCCCCATTCCATTGAGTTTTGCTACAACGGGCAGGTTTCACATATCATCTCTCCCTCTTTTTATA TTAAT
• Tissue: pods
• Gene name: LI_gene_168927;
• Additional information: details;

Expression of Ll_transcript_484224

FPKM

• PAB: 0.2
• PNAB: 0.8
• PS1: 0.4
• PS2: 0.3
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484224

• Blastp: 5'-nucleotidase SurE from Sulfurimonas with 29.35% of identity
• Blastx: 5'-nucleotidase SurE from Sulfurimonas with 29.5% of identity
• Eggnog: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates (By similarity)(COG0496)
• Kegg: Link to kegg annotations (Suden_1536)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020221296.1)
• Pfam: Survival protein SurE (PF01975.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;