Ll_transcript_484225

• Id Trinity: TRINITY_DN49388_c7_g3_i4
• Name Transcript: Ll_transcript_484225
• Sequence: CTTTATGAGTGGGTTTGAAATGAAAGAAGACAGAGAGGAAGATCTATATCTAAGAAAGATCCGATAGCACGTTCATTCATAGTAGGTAGTGGTTTCAGAC GCATTTTCCACTGGGTGCACATCTGTAACATAATGTGTGTTCATGTGCCATTCATTTTCATTTGTTCAAAAAAAAATATTTAAGTTAAAAAATTAATAAT TAATTATTTTCTCATTGATCATAAATTGTGACACGTGGAGTGATACACTTCTGTGGGATAGATGTTCATCATTTACAGTTGAAATGAATGTGAACGTGAA GTTATTGTTATTTATTACACTGAAATGAATGTGATGCTATTATTACACTGAAAAGAGAGAGAGAGAGGGAGAGAGATAGAGAGAGAGATGGAAGAGTCGA AGAAGAAAGCAACGATTCTGATAACAAACGACGATGGAATAAACGCTCCTGGTTTAAGAGCATTGGTTGAGAGTCTGGCGGAAACGAATGAATTCAACAT TTATGTAATCGCTCCAGATAGTGAGAAGTCATGTATTGCTCACTGCATTACTTGGCTTCACCCTCTACATCTCAACCTTACTCATATTCATGGAACCATC TCTTCCTTTTCCGTTTCTGGTTCTCCCGCTGATTGTACTTCCCTCGGAATTTCCAAAACACTCTTTCCCACTGTTCCTGATCTGGTTATCAGTGGCATAA ACAACGGTGACAACACCGGCTATGACATTTTTTACTCAGGCACTGTAGCTGGAGCTCGTGAGGCCTTCTTCAATGATATACCTTCTATGTCCATTTCTTA TTACCGCCCTGATTGGGCTGAGGGTAATAGTAAGATACATGACTTCATCCTTGCTGCACAAGTATGCGTGCCTATCATACGTGCTGTTCTGGTTGAGATA AAGAACCAAAGCTACCCTCGAAGATGTTTTTTGAATATAAATGTGCCAAACAATGTTGCAAATCATAAGGGTTATAAGCTGACCAAGCAGGGTAAAAGTA TTTGCAAAATGGGATGGAAGCAAGTCACCTCTGAGACAGAAGGACAGAGAATGTCATCTAATAGGACCAATATAAATACAGAACCACCTAAAAAAAATGG CACAGTATCATCTGTATCTCCAGAACATCTTTTGTTTCTGAGAGAGGTGGGTTCATTTACTGTCTTTTTATTTACTTGAATCTCGATATTTCATTTATAA GTAGGCTATCATCCAGTACCTTCAGATGAACTCCTCTATTTGTCATAAGTTCTGCATACCTTCGTAGTCTTGAGCTTCAGTGTACTTGTTTTAGTCAGTC TCAGAAGGCACTGTAAGTGTCAGTTTTGTCAACTTCTGAAGTAGATGCCTAGTTATATTGGAAAACTTAAGTCCTTTACCATCTTAGTTGGATTGACATT CCTAACTAACCTTAGTTCCCTCCTCTTTTTCCCAAAGAAAATAAGACAGTACTTTTTTAACTAATGCAGGTAATAGGTTATACACTTGATGATGATGATG GTACCGAGTACAAATCTTTGCAAGAAGGATATGTGAGTATATATAATATAAAGACATACTAAATTAATTTCATACATAAACTGTGACTAACATGGTAAGC ATTTTCATTTTCTCTTAAGATTACTGTGACTCCTCTTGCTGCTCTTTCTGATGCGGAGTTCAATTGTCAGACCTTTTTTAAGGAATGGCTAGGAAGTGTC TCTGAACTCTCCTCTTCATCGGCATTATAATGTTGTAAGAACTATCATGTGTTTGTAGCTTATATGATAGCTTTAGTAATATTTTCAACAAATGTAGCTT CCTTTCTAATTTGTGGTGAAAGTGACTCTTGATAGATGAACGGAATATTTAAGCAAGGTTTTAAATAAAATAGTGTGTTGTAATGACATTACAGAGCCAA GTTATTATAGTGAGGGTGTAATTGACATAGTATTGGTTGCTATTGTGTGATTTTGAGCCATGTACCCCATCCCCATTCCATTGAGTTTTGCTACAACGGG CAGGTTTCACATATCATCTCTCCCTCTTTTTATATTAAT
• Tissue: pods
• Gene name: LI_gene_168927;
• Additional information: details;

Expression of Ll_transcript_484225

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.8
• PS2: 0.3
• PS3: 0.3
• PW1: 0.1
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_484225

• Blastp: 5'-nucleotidase SurE from Sulfurimonas with 42.02% of identity
• Blastx: 5'-nucleotidase SurE from Sulfurimonas with 42.7% of identity
• Eggnog: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates (By similarity)(COG0496)
• Kegg: Link to kegg annotations (Suden_1536)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_013453323.1)
• Pfam: Survival protein SurE (PF01975.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;