Id Trinity | TRINITY_DN49389_c8_g1_i6 |
---|---|
Name Transcript | Ll_transcript_482617 |
Sequence | ATTTCCTATCCCAAGAAAAGTTGCATTGTCTTAGACAGTCCAAAATTGAGATTCTGAAGAGTGGCTAAGATTGTTTCTCTACTCTCCCCTTGTCCGCTTC TCACTCTCTTTTCAATCTCATCTTCCTCTTTTTATCCTTCTCTTCATTTCCATTTCTTACTCAACCTTCCTTTCATCTCTTGCTACGTCACAACGTTCTT TCCTACAACATCTTCATATAATACCATTCAAACACGACATCTTTAAACACATTTTCTGTTCCTAGTTAGCTCTACCTGTTGTTCTAGATTGCATAGATCT GCATGTCCATGTGCCCATTATCTATTATTCCATAATAAGTAGAGAGAGAGAGAGAGAGAGAGTATTTAATTATCTATTGATGGTTGAAGCTGAATCAGCA AGAATCTGAACAATCTAAGAGAAGGAGAGAGAAAAGGTTAAATCTTTATTATAGTTGAAAGTGGTTGTGACGGATCCATCAAGAGAAGAGAGTGGTGGAG GGTGTAGTTGTTTAGGACTGGAGTGCATTTACTCAATCCTAAGTGCTCTTAGAATGGGTTCCTGCTTCTCTGTAGAAAGCAGGAGCCCACACCCAAGTTA TAGGAAGAACTCCAACAACAAGCATGGATCACACACTTCTTCCATTCAGTACTGGAAAAATGAACCACTTCATAGGCTCCCTTCTAGGATCTTCCTTAAT GCCTCTACCCAATTTGCTTCCTTGTTTACTCAACAAGGCAAGAAGGGAACCAATCAAGATGCCATGCTTCTTTGGGAGAACTTTTGTTCTCGGCAAGATA CAACTTTCTGTGGAGTTTTTGATGGTCATGGTCCGTATGGTCACATGGTTGCGAAAAGAGTGAGGGACTCTCTTCCTCTAAAACTGAATGCTCATTGGGA ACATTGTGTGTCTGGTGATGAAGTCCTCAAGGAGATCACTGTTAATGCTGCTGGAAGCATGAATTCGGAAGAGGCCGCTATTGTATCTGCTGATGAGGAA TCTAGGACATCCATTGACGCCGAGGAATCGACGAAACACCCAGAAATATTTCAGACACTTAAGCAGTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAG AACTAAAGACACATCAAAGTATTGATTGCTTTTGTAGTGGGACAACAGCAGTCACTCTTGTTAAGCAGGGTCGTCATCTTATTATCGGAAATGTTGGGGA CTCTAGAGCTGTGATGGGTACAAGAGCTAAAGATGACTCTATTGTTGCAGTCCAGTTAACTGTAGATCTAAAACCCAATCTTCCAGGTATATTACTTTTC TGGTAGTTCTTCCTTACTTTGTTTAGAAGTAACATAAGATAGTGAGAATCTTAAATCCAGTCCGGGAGAATACTAAAAATGTCATTGTTTTCTTATTAAT TCCATGTCCATGTAAGATACTTGTGTCTGCATTTTATTTAAGCTACCGAAAGTATATCACGAAGGGGGAGAAAGGAAAATTCTGCTCTAAATCAGTTCCA TGAAGAACATAGTTTACTTGAAACATGTTCCATTCGTTTTGAAGTAATCTCTATCATACTATGTTTTCGATCTGTCATACTATCATGTAATGATATACTA GTTTGCAGACAAAAAGCGCATTTTCGTGATGCAATTGGAATGATATCTGCTATTCTGCATATTGTCTAGAAATTCAGCTTGTGAATCAAAATATGAGGCC TCTATTCTTCTAGTTTCTGAAACTCTCAGTTTATATCACATTTTTTCTGATTTACTTCTGATAGGAAATTGGTCCCAGTACTATAACTAATTTTTAGTTC ATTTTCTGTGTTAGTTTCTAGAGAAAAATAATATTAGCCAATCTAAAGTGCATAGAAGTACAGATCTAGGTAACACTATCTAAGCTTTGTAAGTTGGCAT TGTTTTCTATTACTGTTGTTCATGGTCAGCTTTGTTGCACGGGTACGCTGAACATGGAGAAGAACTTGTACCCGGTGCATGTCTGGTACCTCCGAGTACG TACCCACTACCCAAGACAATTGCTGTTGGGTCCAGATTCGGGTATGTCGGGTTCATTGTGGGTACAGATTGCCCAAAAACAATACAGTTTTTGGAATTAT TTAGGGTTTGAAGGTGCCTGGAACCAAATTGCGCACATAAATCCTGTTAGGACTTAAGCACATGAAGAGAAACTAACCCAAGAGACTAGTCTATTAGGCG GGAGAGCCTGATGTCTTAAGTAGTTAAGTACCGAATTGAGTTTGTTATACTACTCAATGAGCCACTCCTAACAAACTCCCTGGTTGGTTGGTACTAGAAT ATGGGTTTCAGATGAAAATTACAGAGAATGGAAAAGTGGAAAGGGAGAAGGCACCAACCGATTAGAGTCCGTTTTCTTGAATTTTTCTATTTTTTGAATT CCATTATTATTATTTATTAATAGATCAATAACAAAAAGTAAATAATTTCTGTTTTTTTTAAATAGTCGTGCTATTTAGTATGAACTGCAGA BLAST |
Tissue | pods |
Gene name | LI_gene_168944; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_482617
Blastp | Probable protein phosphatase 2C 33 from Arabidopsis with 61.89% of identity |
---|---|
Blastx | Probable protein phosphatase 2C 33 from Arabidopsis with 61.89% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT3G02750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431642.1) |
Pfam | Protein phosphatase 2C (PF00481.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |