Id Trinity | TRINITY_DN49404_c0_g1_i2 |
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Name Transcript | Ll_transcript_354299 |
Sequence | CAGAAGAGGTGCAAAAAAATTCCTGTTAATTACACTTGCCCAATATTTGTTTCTGAGTGCTTGAATTTGAGTTGATGACATAAAACAACTTTATTGCTAC AGCTTCCAGATTATCATGATATCATTAAGCACCCGATGGATTTTGGAACTGTGAGGAACAAGTTGGATGGGGAACTTTATGCCTACTTAGAACAATTTGA GAACGACTTGTTCCTGATATGCTCTAATGCAATGCAATATAATTCCCCAGATACTATTTACCACCGACAGGCCCGGGCCATGCAAGAAATAGCAAAGAAG GACTTTGAGAATTTAAGACAAGATAGTGATAGTGATAGTGAACCGCAACCCAAACCACAAGACAAGATTGTGCAGAGAGGAAGGCCACCAGGCAAGAACA TAAGCAAGTCGCTGCCCATGTCTCCTTCAAACCGTGTTGCTCCTGAATCTTCCTCTGATGCGACTCTTGCTTCTGGTGGAGATATAGCCAGTGGTTCCAA TGGTTATAACCTAAGAAAAGCACTAAGCAGATTTCAGCCTGCAGATTCATCAGCTAGGGCCTCCCACGACAATTTAAATAGTGGAGGTTATACTAGCTGG TCGTATGATTGGGAGAATGAATTTCCAGCTTCTATTTTAAAAGCTGTGTTAAGGTATGGAAAGAAGCAGTCTGTGGTTGATGAGACCAGGCGTGACACTT ACAACCATCCAGTCACATTAAGAAATGAACCACCATTAGTGGCCACAGTTGAAAATGAATTCAAACAGCTACTTGCGGTTGGTTTACATGTGAAGCATGG ATATGCGAGAAGCGTGGCCCATTTTGCTGCAGATCTTAGTCCTGTTGCGTGGAAGATTGTTGCAAGGAAAATCAACAGTGTCCTGCCACCAGGACATGAA TTTGGTCCTGGATGGGTAGCTGAAGAT BLAST |
Tissue | pods |
Gene name | LI_gene_169058; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354299
Blastp | Bromodomain and PHD finger-containing protein 3 from Homo with 40.91% of identity |
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Blastx | Bromodomain and PHD finger-containing protein 3 from Homo with 41.25% of identity |
Eggnog | bromodomain(COG5076) |
Kegg | Link to kegg annotations (27154) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417398.1) |
Pfam | Bromodomain (PF00439.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |