Ll_transcript_354303

• Id Trinity: TRINITY_DN49404_c0_g1_i6
• Name Transcript: Ll_transcript_354303
• Sequence: AGAAGATCACGTGAGTGACACAAGATAATACAATAAATAAAATAGATAAAGAAAAAGAAAAAGAAAACGAGGGGGAATGAAGAAGGTGTAGTTGTGTTAG GGTGGTTGAAGCGAGAAAAGAGGAGTAAAGAATGGGTGACGTATCTGATGCAACCACCAAGAAGAAGAAGAAGGGTCGTCCTTCTCTTTTAGATCTTCAA AAACGATCTCTTAAAAAACAACAAATTCATTCTCTTAATTCCCATTCTACCCTTCACCATCAAAACGACGACGATGATGAACGTACCCAGAAGAAGCAAA AGCTTTTGATTCGTCTCAATTCCCATCATTCTTTCAATTCCAATATTCAACGCCAAACGGATGGAAAGGTTCTGAAAGTGACTGAGAGTAAAGATGGTTC ACAGGGTGAGTCAGGTCCCACTACACCTTTGCCAGATAAAAAGCTCTTGCTATTTATCCTTGATAGGCTTCAAAAAAAGGACACTCATGATGTATTCTCT GAGCCGGTGGATCCGGAAGAGCTCCCGGATTACCATGATATCATTAAGAACCCAATGGATTTTGGAACTGTGAGGAACAAATTGGAGGGGGGACTTTATG CCAACTTAGAAAGTTTTGAGAGCGATGTGTTCTTGATATGCTCTAATGCGATGCAATATAATTCTCCAGATACTATTTACCACCGACAGGCCCGAGCCAT GCAAGAGATAGCGAAGAAGGACTTTGAAAATTTGAGACAAGAGAGTGATAGTGATAGTGAACCACAGCCTAAACCACAACACAAGATTGTGCAGAGAGGA AGGCCACCAGGAAAAAACAACATAATAAAGTCACTGACTATGTCTCCTTCGGACTGTGTTGGTCCTGAATCATCCTCTGACGCAACTCTTGCTTCTGGCA GGGATATTGCCAGTGGTTCCAATGTTTATAATCTCAGAAAAGCACTAAGCAAATTTCAGCCTTCAGATTTATCAGGGAGGGCCTCCCATGGCAATTTAAA TAGTGGAGCTTATACTAGTTGGTCGTATGATTGGGAGAATGAGTTTCCAGGTCAATATCTGTACCTTCCTAATGTTTTTGTTTTTCCTTCTGGATTCAAT CATTGGCGAAAAAATACTGAGTTTATTGAAATGATTCCTTTTTTTACATATTTTGCTTTCAGCTTCTGTTTTAAAAGCTGTGTTAAGGTATGGAAAGAAG CAGTCTGTGGTCGATGATACCAGGCGTGACACTTACAACCATCCAGTCGCATTAAGAAATGAACCACCATTGGTGGCCACAGTTGAAGATGAATTGAAGC AGCTACTTGCTGTATGAATTTCTATTTTTTTTTCTTCTCTCTCTTTTACTTCCCCCAACCACAGAATAAAAACTGGAAGCAAGTTAGGCAAACATCTTCT GTGAATCATTGTAGTTTGAAATTTTTTTAGTCTGTAGGTTGGGTTTCTATCTCATGCTCAGTCAGTTCTGACTGTTTTTTGTTTGCTACAAAATTTGTTT TCATTCTTTTTACAAACCAGGTTGGTTTACATGTGAAGCATAGTTATGCAAGAAGCCTAGCCCATTTTGCTGCAGATCTTGGTCCTGTTGCTTGGAAGAT TGCTGCAAGGAAAATCAGCAGTGTATTGCCACGGGGACATGAATTTGGTCCTGGATGGGTAGCTGAAGATAATGTGTCACAGAAGCAACACTTCCCGGCT TGTGATGATGAGAGAACTTCAGACCCTCCTGTACCAGAGGATTATAAAAGTAGTTTTCTTTCCCCCTCTGGATCACTCCCTGTTGTAAACAGACCATTCT TGCAAAGTGGAGACATGGTAATGAATAGAGAGTTTAATTGCCAAAATGATTTGAATCCCGTCAACAATATTGGTGGTGGTATTGAATCCATGGTTCCTTC GAGGATGCAACAGGAGTCCATGGTGCGCTCTGATGATTATGGTTCAAATTGTCGACCCGGGACTAATTTTTCACCTCAAATGAAGATGGTAAGACTTGCT GACTTAACTGGATCAACCAGTTCTGCGAATGTTCCCCAAATGCTCGACATGGATTCCATAAGCAGCCGCATGGTGCCAGCAAATATTAATCAGCCACTTA GAGGGCAGTTCTTAAACCAGCGAAATCAACTAGATTCCAGTAATTTAGTGCCCCTGGAATCTGGATTTGAGTCACAAAGTTTGTCTCAAGGACTTGCTGG AAAATCATCTTGGCAGGGAATGGAAGTTCCCACTAATCAGAGTCCTTTTCCACTTGCTAATGACTTAAATGGGAAGATTGTAGCAACAAATTCAGGTGGT TCCAGTGTGGAGACTGGTTCTCAGAGGCAGCCAAATTTGGCATTGCAACTATGACAATAAATACTCTCTTTTTTTCTCTTATTTGATTTAAGAATCTTTC AGTAGAGTTATCTTATTTTTATTTTTGACTTTATGGTGGAGGCTGGCATAGGCTATGCCAACATGCTTATAGTTCAGTTTGCATCTTCAATGTACCAAAA TTATAGTAATAGTGATGGTGACTGGGTTAGCTATTGCCTATAGCCAATGGCTCAGTGGCTGCAACTTATCTTAGTTACATACACATTTGTAAAGCTTTTA ACATGCAATGTTCAACATTCTATAATCATTTATTTTGGAAAAGGTGGTTCATTATTTAAATGAAA
• Tissue: pods
• Gene name: LI_gene_169058;
• Additional information: details;

Expression of Ll_transcript_354303

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.3
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354303

• Blastp: Bromodomain and PHD finger-containing protein 3 from Homo with 43.52% of identity
• Blastx: Bromodomain and PHD finger-containing protein 3 from Homo with 45.36% of identity
• Eggnog: bromodomain(COG5076)
• Kegg: Link to kegg annotations (27154)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438109.1)
• Pfam: Bromodomain (PF00439.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;