Ll_transcript_354305

• Id Trinity: TRINITY_DN49404_c0_g1_i7
• Name Transcript: Ll_transcript_354305
• Sequence: AGAAGATCACGTGAGTGACACAAGATAATACAATAAATAAAATAGATAAAGAAAAAGAAAAAGAAAACGAGGGGGAATGAAGAAGGTGTAGTTGTGTTAG GGTGGTTGAAGCGAGAAAAGAGGAGTAAAGAATGGGTGACGTATCTGATGCAACCACCAAGAAGAAGAAGAAGGGTCGTCCTTCTCTTTTAGATCTTCAA AAACGATCTCTTAAAAAACAACAAATTCATTCTCTTAATTCCCATTCTACCCTTCACCATCAAAACGACGACGATGATGAACGTACCCAGAAGAAGCAAA AGCTTTTGATTCGTCTCAATTCCCATCATTCTTTCAATTCCAATATTCAACGCCAAACGGATGGAAAGGTTCTGAAAGTGACTGAGAGTAAAGATGGTTC ACAGGGTGAGTCAGGTCCCACTACACCTTTGCCAGATAAAAAGCTCTTGCTATTTATCCTTGATAGGCTTCAAAAAAAGGACACTCATGATGTATTCTCT GAGCCGGTGGATCCGGAAGAGCTCCCGGATTACCATGATATCATTAAGAACCCAATGGATTTTGGAACTGTGAGGAACAAATTGGAGGGGGGACTTTATG CCAACTTAGAAAGTTTTGAGAGCGATGTGTTCTTGATATGCTCTAATGCGATGCAATATAATTCTCCAGATACTATTTACCACCGACAGGCCCGAGCCAT GCAAGAGATAGCGAAGAAGGACTTTGAAAATTTGAGACAAGAGAGTGATAGTGATAGTGAACCACAGCCTAAACCACAACACAAGATTGTGCAGAGAGGA AGGCCACCAGGAAAAAACAACATAATAAAGTCACTGACTATGTCTCCTTCGGACTGTGTTGGTCCTGAATCATCCTCTGACGCAACTCTTGCTTCTGGCA GGGATATTGCCAGTGGTTCCAATGTTTATAATCTCAGAAAAGCACTAAGCAAATTTCAGCCTTCAGATTTATCAGGGAGGGCCTCCCATGGCAATTTAAA TAGTGGAGCTTATACTAGTTGGTCGTATGATTGGGAGAATGAGTTTCCAGCTTCTGTTTTAAAAGCTGTGTTAAGGTATGGAAAGAAGCAGTCTGTGGTC GATGATACCAGGCGTGACACTTACAACCATCCAGTCGCATTAAGAAATGAACCACCATTGGTGGCCACAGTTGAAGATGAATTGAAGCAGCTACTTGCTG TTGGTTTACATGTGAAGCATAGTTATGCAAGAAGCCTAGCCCATTTTGCTGCAGATCTTGGTCCTGTTGCTTGGAAGATTGCTGCAAGGAAAATCAGCAG TGTATTGCCACGGGGACATGAATTTGGTCCTGGATGGGTAGCTGAAGATAATGTGTCACAGAAGCAACACTTCCCGGCTTGTGATGATGAGAGAACTTCA GACCCTCCTGTACCAGAGGATTATAAAAGTAGTTTTCTTTCCCCCTCTGGATCACTCCCTGTTGTAAACAGACCATTCTTGCAAAGTGGAGACATGGTAA TGAATAGAGAGTTTAATTGCCAAAATGATTTGAATCCCGTCAACAATATTGGTGGTGGTATTGAATCCATGGTTCCTTCGAGGATGCAACAGGAGTCCAT GGTGCGCTCTGATGATTATGGTTCAAATTGTCGACCCGGGACTAATTTTTCACCTCAAATGAAGATGGTAAGACTTGCTGACTTAACTGGATCAACCAGT TCTGCGAATGTTCCCCAAATGCTCGACATGGATTCCATAAGCAGCCGCATGGTGCCAGCAAATATTAATCAGCCACTTAGAGGGCAGTTCTTAAACCAGC GAAATCAACTAGATTCCAGTAATTTAGTGCCCCTGGAATCTGGATTTGAGTCACAAAGTTTGTCTCAAGGACTTGCTGGAAAATCATCTTGGCAGGGAAT GGAAGTTCCCACTAATCAGAGTCCTTTTCCACTTGCTAATGACTTAAATGGGAAGATTGTAGCAACAAATTCAGGTGGTTCCAGTGTGGAGACTGGTTCT CAGAGGCAGCCAAATTTGGCATTGCAACTATGACAATAAATACTCTCTTTTTTTCTCTTATTTGATTTAAGAATCTTTCAGTAGAGTTATCTTATTTTTA TTTTTGACTTTATGGTGGAGGCTGGCATAGGCTATGCCAACATGCTTATAGTTCAGTTTGCATCTTCAATGTACCAAAATTATAGTAATAGTGATGGTGA CTGGGTTAGCTATTGCCTATAGCCAATGGCTCAGTGGCTGCAACTTATCTTAGTTACATACACATTTGTAAAGCTTTTAACATGCAATGTTCAACATTCT ATAATCATTTATTTTGGAAAAGGTGGTTCATTATTTAAATGAAA
• Tissue: pods
• Gene name: LI_gene_169058;
• Additional information: details;

Expression of Ll_transcript_354305

FPKM

• PAB: 23.6
• PNAB: 8.1
• PS1: 10.7
• PS2: 7.3
• PS3: 10.9
• PW1: 9.3
• PW2: 8.1
• PW3: 10.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354305

• Blastp: Bromodomain and PHD finger-containing protein 3 from Homo with 43.93% of identity
• Blastx: Bromodomain and PHD finger-containing protein 3 from Homo with 44.9% of identity
• Eggnog: bromodomain(COG5076)
• Kegg: Link to kegg annotations (27154)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438109.1)
• Pfam: Bromodomain (PF00439.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;