Ll_transcript_352836

Id TrinityTRINITY_DN49406_c0_g2_i7
Name TranscriptLl_transcript_352836
SequenceCGTGTAATGAGATTTGCATACCGTGTATGACGTTCCAACTTCCGTATAAAGGAAGTCTTTGTTATAATAATGTAAAAAAAGTGAAGAACCATGTAGAATT GGCTACCGCGTACCGGTAACACGAACCATGTAACTATGAATTCCTGCCGCTCAGGTGTTTCCGACCTAAAATTTGTTCACCAAAAAAAAATCCTTTGCAT TTAGGATAATTGTTTTTAATTTTTTTTAAAACAGATGCCACAATACAGTTCATTGATTTCATACTTTTTGGTGAGTTAAATTCAGTGAATATGGTGTTGC CTTAGAGTCTTGGCTACTTGGTTGTTTCTTCTGAAACATTGTAGGTTAGTGCAGTAAAATGTGGAAGGATTCAAGTTGACGGTGGGATGGTGCCAGTTTC ATACATGGTTAAATCATCTCAAAAGATAAGCCATTTCGTACACAGGCATGAACCACCTGTGATGGCTTGCGTTGTTCCTATTCTTCAAAAAGAACCGGAT GTGCTAACAGTTTGTAAGCCAGCATCCGTCCCTGTAAGTAAGCATTAACAAGTGGACTGATGAATTGACGATTTTATAAACCTGTCATGTTCAGTAAGAT ACATAGGGAATGTACTTGCTCTCTTCCAGCTGTTTCCTAACTATTGTTTTTAGTCTTATGATGTTTTCTTCTGATTTTTACTGAAAAAAACATAAATTCT TGTATCGATCTTCTATGAATATGCAATTTACTAATACATACGTTATATTTTGTAATTAGAATAGTTTTAGCAATAATACCCCTCTGTTAAGATGTCACTT TTTTTGCATTACTATCAAAGATGCATAAGAATTTCTTCAAAACAAAGATACATAAGAATTGGCTACAAAGGACAAAATGCAATATCTTTTTAGTGGGAAT GCCTCTGTGTATCTCTGTGCCAGATCCAGAATGTTTTTAGCTTTCTGCTTGTCTTATTTTACATGTCGTGGGTTTTCAATTGCTTAGTATCTCCAAAAGA CTGAAATTAGCATCCTAATTATTCATTTATTCAGTAAGCTATTTTGAACTCTGCTAAAACGAATGTATTTTCGTATGCTTCTCTGATAAGCTTACTGACA TAAGCTAAACAAGCTTATAGGGAGGTCATAGGCTATTTTCGTAAGCTTAGGAAAATAAGCTGTTTTCACTTCTCAAAAGTCAACTAAGCTCTCTAGAATC ACTTAACTCAATATGATTAACAAGATGTTGCTTTTATGGTATTGAAATTATTTCCTTAAGTTCTATGAAAAGAAAGTCTGAATTCTAAACTCATTTTTCA GTACTAAGATACAAGATACATTTGTAAAATTCAGTTGCTTCTTAATCATAGACTGATCTGTATTTCATATTTCATATGTGCTAATGCTGTGTATTTTAGC GGTTACATAGGTTCATCCATGTGGTCAATATCGTAAGAACACTGTTGTTGGCATCCTTGAAGCAGAGCATGGGCTAGCACCTCTTTTTCGTATCCAAATT TATTTTTTTGAACTAGATTATGTAATCATTATCATTATAAAAGATAAATGTTTTATGCTAATAAGGTTTTTGATTTCCAATTACCACAGAAAACATGTAT ATTAGAGGGTGAGCCTCGGCACAACGGTAAAGTTGCTTGCCTTGTGACATTGAGGGCTTGAGTTCAAATCCTGGAGACAACCTCTTATAGCTTGACAGGG CAGGACTGTGTACATCTATCCTCCACATGCCCCACTAAGTGGGAGCCTCATGCATTGAGCCGCTCTTTTATAGATAACATATATATTCTCTCTCGTACAT AGTTTCTTTGCATACCATATCTGTTGCAGTTTATACATTTGTATTTTGCCTTGACATGATCATCTCAGCGATTCATCGACTGGATCGCCTTGTCTCAGGA CTTCTCATTTTGGCTAGAAATGCTTCTAAAGCTGATATGTTTCGGCAGCAGATTGAAGGTGGCTTAGTCAAGAAACAATATATAGCAAAAGTAGTTGGCG AGTTTCCTAAGGATGAGCTAATTGTTGATGCGAATATAGACTACAATGCTCGAGAAGGAAGGAGCACAGCAGAGGTCAGAGACTCTGCAAAGGGGAAGAC TGCCTCTACGAAATTTAATCGGATTAGTTCGAATGGTACTCAAAGTATTGTTTTATGTGAACCAGTAACTGGTCGTACTCATCAGGCAAGGAACTCTTAG GCTAATTTCAGCTGATATGGATTGATTGTTTCTCACCACTCAAAGCTTAGCCAGCACATTTAATACTTTTCTATTTTTCCTCAGCTGAAGATGTTTTCGA TCTTTATACATGGTTATTCTGTTGAGTTACAAATTATTATCTTCAAACTCCAATATATTTTGAGGCTGAGCTCTTGCCATTACATGTACATAAATATGTA GTTGATTTGCTTCCGCACATGCTGGCTCGCCATTGGTGTCACACAGTGACAACACATCCAAAGTGGGCTGAATGCCAGTCGTGCTGTCTCTCTATTCGTA GTATTATTTTAGGCAGCAATTTCATCAGCTGAAGATGATACCATTGTTCCTCAGCTGAAGATGATGCTTTTGATCTTTATAACGTGTTTATTCTGGTGAT GTAATTCCATTGCATGTCTCTGGTATCTTAGTTACGCATGATTAAGAAAGACTTAGAAGTAAATTTTTTGTCAATTAATATGATTTATTAGAGAACATTA TGACATTGTTTGATCCATGTAGCCGATCCCACCTAATGGGATAAAGGATTGATTGTTGTTATTGTTGTACGTTTTGGGGCTAAACTCTTGCAGTCACATA GATGTAAATATGACGTCGTTGATTTGCTGCCACATGTGCTGACTCGCATGTGATGTGTCACAACAGTGTCATCACATCCAAAGTAGGCTGCATGCCAGCC TTGCTTTCTGTATTTGCATTACAATTTTAGGCGACAATAAGTTTCATCGTTTCATTAATACCATTGTGTGAAAAGAGAGCAGTAAAGGAAATGGAATAAA AACCAGAGATGCAGTTATGAGGACCAAAGACATGGTGCACTTTATCTGTTCAACTTGTTAGTATTATAAATATTGGTGCTAACAAGTACTCACCTCTTGT GTAGATACGTGTTCACTTACAGCATTTGGGACACCCAATAGCCAATGACATGCTGTACATCTCAGAACAAACTATTGATCGATCTAGTAAAGGGTCAAGT GCCGATAGATCAGCTCGCATATCTGAAGCTTCCCTGACATCAAATTTTGATGAAAAAGTGATCAATGAATGTGAAGAAAATTCAGATTCCGATTTAAGCA TTGATCCCATGTGTACAAACTGTCCAAATTTGGCACCCAAAGGATATGATGGTGATGAAGAAGGTCTATGGCTACATTGTTTTCGGTACTGTGGACCTGG ATGGGAGTATGAATGCCCATATCCTGATTGGGCCAAACTTAGCTAGACAATTTAATCATGGGACTCTTACAAAACATATAACAGCAATTTATCTGAACCT TAAAACCCAACACACTTTAGTTGGAAGCACATCTTCTGTCTCATAAAGTGTATCACTCTATGTATCATTTGATGTTTCATAAGAATTTTCAGTCTGAGTT GGTTATTTATTCTTTTTATCCAGAGACACTACAGAAGAATGAACATTTATTATTATTTTGGTGGCAGAGGAAAGGTGTACAAGATACACAAGATGTTTCT ATCTGAAAATGACATGTTTTGTTAGTGCAAATGTACTAATATTTTGTGGTCAAAGTATGTGTTGCTTTTTGGACGTGAATGTATTGCATTTGGCAACTGA GTGAAAGGAACTTGGAGGACAAATTATTAAGACATATGTTCTTACATGTAACAGCTGGCTGAACAAGATTATGGACGAATTTCGAAGTAGGATTGAGTGT TTGAGTTTGCGGCTGTTACTTGTTTTATATAATATACAATAATGTTTTATTTGTTCTAGTTCACAATTTTTAATATAGGCTTCAAATTAAATTAAATACA GCTTCACTTTCTCATATCAATTCTATATGAACATATTAGATAATAAATATTAC BLAST
Tissuepods
Gene nameLI_gene_169072; 
Additional informationdetails; 

Expression of Ll_transcript_352836

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_352836
BlastpRNA pseudouridine synthase 7 from Arabidopsis with 71.68% of identity
BlastxRNA pseudouridine synthase 7 from Arabidopsis with 71.05% of identity
Eggnogpseudouridine synthase activity(COG0564)
KeggLink to kegg annotations (AT5G51140)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019417834.1)
PfamRNA pseudouridylate synthase (PF00849.21)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;