Ll_transcript_352840

• Id Trinity: TRINITY_DN49406_c0_g5_i13
• Name Transcript: Ll_transcript_352840
• Sequence: CTGAAAGAGACCCGGAAATATAGTTAACTGTTTCGATTTACTTATATTAGAACTCAGAAGAACCGCATTAGAACGAAGAAGAATATTCGTTGCAACGAAA ATGGAGTCGTTGAAGAACGATGAAATGTTAGAACAACAATTGAAAGCTCCGTCGATCGAAAACGAAGCTATTCTCTATGTTAATGGTGTTCGTAGAGTCT TGCCTGATGGATTAGCTCATCTCACACTTCTTGAGTATCTCAGAGATGTAGGCCTGACCGGAACTAAACTAGGATGCGGCGAAGGCGGTTGTGGAGCTTG CACTGTTATGGTTTCTCATTATGACAGAAAACTGAGGAAATGCTTACACTATGCTATCAATGCTTGCTTAGCACCTCTATATTCGGTAGAAGGGATGCAT GTGATTACAGTGGAGGGTTTGGGAAGTTGCAAGCGCGGATTGCACCCGATCCAGGTCATACATGCACATACTATTTTCTTTTATGATGCTAGTCCACTTG GTTTTTTCACAGAATACTGTAACACCGTTTGATTCATGCAGCTGACCCCATCTTGTGGGGAAAGGCTTTGATTATTATTGTTGTCCTTTTGGCGTTTGCT ACTGTTTTGAGTATCCTTTATTTGTTTGGTTCTCATGTTGTGATACATTTATGGGCTTAGCCTTTGATTATTATTGTTGTCCTTTTGGCGTTTGCTATTG TTTTGAGCATCCTTTATTTGTTTGGTTCTCATGTTGTGATACATTTATGGGCTTAGCCTATGTGTTTTCTCATATTTTTAATTTGGATTTACTCGTTAAT ACTTTGAACCTACCCTTGTAATGTAATCTCTCCAGGAATCGTTGGCACGCAGTCATGGTTCGCAATGTGGATTTTGTACACCCGGTTTTATCATGTCCAT GTATGCATTATTGCGGTCAAGTCAAACACCACCTACTGAAGAGCAAATTGAAGAAAGCCTGGCAGGGAATTTATGCCGATGCACTGGTTACAGACCAATA CTTGATGCATTCCGTGTCTTCTCCAAAACTAATGATATCTTATATACTGGGGTGTCTTCATTGAGCCTTCAGGAAGGCAAATCTATTTGCCCATCAACCG GAAAACCGTGTTCATGTAATTTAAACAATGTGAGTGATAAGCATATAGTCAGTGATGATAGATATATACCTACTTCCTTTAATGAAATAGATGGGACCAA GTATACAGAAAAGGAGCTTATTTTTCCTCCTGAGCTGTTGTTAAGGACACCAAACTCCTTAAATTTGACTGGGTTTGGTGGACTAATGTGGTTTCGGCCT TTAGCGCTTCAACATGTACTGGATCTAAAAGCCAAATATCCCAGTGCGAAGTTGGTAGTTGGTAACACTGAGGTGGGAATTGAGATGAGACTAAAGAGAA TGCAATATCGGGTTCTGATCTCTGTTATGCATGTGCCAGAACTAAATGCGTTGGATATAAAAGATGATGGATTAGAGATGGGTGCTGCAGTAAGACTATC TGATCTCTTGAATATATTCAGAAAGGTTGTAAGTGAACGAGCTTCTCATGAAACTTCGTCTTGTAAGGCCTTTATTGAGCAACTGAAATGGTTTGCCGGG ACACAGATAAGAAATGCTGCATCAGTTGGTGGGAATATATGTACCGCCAGTCCAATATCAGATTTGAATCCTCTCTGGATGGCTTCTAGAGCAAAGTTTC AAATTATTGACTCCAAAGGAAACATCAGGACGGTAATGGCAGAAAATTTCTTCCTAGGTTATCGTAAGGTGGATTTGGCAAGTGATGAAATCTTGCTATC AATATTCTTGCCTTGGAGTAGGACCTTGGAGTTTGTGAAAGAATTTAAGCAATCTCATAGAAGGGATGATGACATTGCAATCGTAAATGCAGGAATGCGT GTTCATATTCAGGAACATAGTGAAAAGTGGGTGGTTGCTGATGCATCAATTGTTTATGGTGGGGTGGCTCCATTTTCACTTTCTGCGACAAAAACTAAGG AATTTCTCATAGGAAAGACTTGGGGCCAAGATATGCTGCAAAATGCAGTAAAAGTCCTACAAAATGATATATCACTCAAGGAAGATGCTCCTGGTGGAAT GGTAGAGTTTCGGAAATCTTTAACTACAAGTTTCTTTTTTAAATTTTTTCTGTGGGTGTCTCATCAAATGGATGGCATCAAAGAGAGTATACCACTTTCC CATCTATCTGCTGTGCTCCCAGTCCACCGCCCACCAGTTGCAGGGGCTCAAGACTATGAAATCATGAAACATGGGACATCTGTGGGTTCTCCTGAGGTTC ATCTATCTGCAAGACTTCAGGTTACAGGAGAAGCAGAATATGCTGATGACATACAACTACCTCCTAATGGTTTGCATGCAGCCCTAGTTCTGAGCAAAAA ACCCCATGCCCGAATTCTTTCAATTGATGAGTCAGGGGCGAAGTCTTCACCTGGATTCGCGGGATTATTTCTCGCCAAAGATGTACCATGTGATAATAAA ATTGGAGCAGTTGTTGCTGATGAGGAGCTTTATGCTACAGAATACATCACTTGTGTGGGTCAGGTTATAGGAGTAGTTGTAGCTGATACTCATGAAAATG CAAAGATAGCAGCAAGAAAAGTTCATGTTGAGTATGAAGATCTCCCAGCCATCCTGTCAATACAGGATGCCATCAATGCTAGAAGTTTTCATCCCAACAC AGAGAAGTGTTTGAGTAAAGGTGATGTTGATCACTGTTTTCAGTCAGCTCAGTGTGATAGAATAATTGAAGGGGAAGTTCAGATAGGAGGTCAGGAACAC TTTTATCTGGAACCACATAGCAGTGTGATATGGACAATGGATGGTGGAAATGAAGTTCACATGGTATCATCGACTCAAGCACCTCAGAAGCACCAGAAAT ATGTTTCTCATGTTCTTGGTCTTCCCATGTCCAAGGTAGTGTGCAAAACAAAACGAATTGGTGGCGGATTTGGGGGGAAGGAGACAAGATCAGCCTTTAT TGCTGCTGCAGCTTCAGTCCCAGCATATCTGTTAAACCGGCCTGTAAAAATCACACTGGACCGAGATGTAGACATGATGATAACTGGGCAACGCCATAGT TTTCTAGGGAAGTATAAGGTTGGATTTACAAATGAAGGGAGGGTGCTCGCACTAGATCTTGAAATTTATAACAATGCTGGAAATTCACTGGATCTCTCAC TTGCTATCCTTGAACGTGCTATGTTTCATTCAGATAATGTGTATGAAATACCTAATATGAGAATAATTGGAAGGGCCTGCTTCACTAATTTCCCTAGCCA CACTGCTTTCCGTGGATTTGGTGGTCCTCAAGGCATGCTCATTACTGAAAACTGGATCCAAAGGATTGCTATGGAACTCAAGATGAGCCCAGAAAAGATA AGGGAAATTAACTTTCAAGGTGAAGGATCTGTTACGCATTATGGCCAGCAACTTCAGTACTGCACGTTAGCCCAGCTTTGGAATGAACTTAAGTTATCCT GTGACTTTGTGAAGGCACGTGAAGAAGTTGACCAGTTCAATGCTCATAACCGTTGGAAGAAGCGTGGCATTGCTATGGTTCCAAATAAGTTTGGTATATC CTTTACAACAAAGCTTATGAACCAGGCAGGTGCTCTAGTTCATGTCTATACAGACGGAACTGTTTTAGTTACCCATGGGGGTGTAGAAATGGGGCAAGGT CTGCATACAAAAGTTGCCCAGATTGCTGCATCAGCTTTCAGTATCCCCCTTAGTTCTGTCTTTATATCAGAAACAAGTACTGACAAGGTTCCTAATTCTT CTCCAACAGCAGCTTCCGCAAGTTCTGATATGTATGGAGCAGCGGTTTTAGATGCATGTGATCAAATAAAGGCACGCATGGAACCTATTGCTTCCCAAAA TAACTTTAATTCGTTTGCTGAGTTAGCTAGTGCATGCTATGCACAGCGAATAGACCTTTCTGCCCATGGATTTTACATTACACCTGATATTGGCTTCGAT TGGACGACGGGTAAAGGAAAACCTTTTCGGTATTTCACTTATGGGGCTGCATTTGCTGAGGTAGAAGTTGACACCTTGACTGGAGATTTCCACACCAGGG TTGCAAACATTATTTTGGATCTGGGATATTCTTTGAACCCAGCTATTGATGTCGGACAGATTGAAGGAGCTTTTATTCAAGGTTTAGGTTGGGTAGCTTT AGAAGAACTTAAATGGGGAGATGGAGCGCATAAATGGATCCCCTCTGGATTCCTTTACACAGCTGGACCTGGAGCTTATAAAATTCCTTCTATAAATGAT GTTCCTTTTAAATTTAATGTCTCACTCCTCAAGGGTCATCCAAATGTTAAGGCCATCCATTCATCTAAAGCCGTCGGCGAACCTCCATTTTTCCTAGCAT CGGCTGCGTTCTTCGCCATTAAGGATGCCATCAAAGCTGCTAGAGTTGAGACGGGGCATAGTGGCTGGTTTCCTCTAGATAATCCTGCAACTCCTGAGAG AATTCGGATGGCTTGTTTAGATGAGTTTACATCTCCCTTTGTTAACTCAGATTTCCATCCCAAACTTAGTGTTTGATGCTCTACTTATTATTCTCAGGAT GATTTTCTTACAATGTTTTTATGTGAATGCTCACAAAGAATGTGTAGCAATGGATATAACACTTTATAGAGAATAATTTATTTCAGGGATCCAAATTATC CCCTTTATGATGTACAATAATTATTGCATGGAATAAACAATATGGCAACTTATTGTGGGCCTATCACATCCCTCTCTGACCCATATTGGTTGCTAAATTT GATTGCCATAACTAAGGGTCTTAATGTTAAATTACATTTCTATATAATCTATTGAATAATAACCAACAAGGCT
• Tissue: pods
• Gene name: LI_gene_169075;
• Additional information: details;

Expression of Ll_transcript_352840

FPKM

• PAB: 0.2
• PNAB: 0.9
• PS1: 0.8
• PS2: 0.4
• PS3: 0.3
• PW1: 0.3
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_352840

• Blastp: Xanthine dehydrogenase 1 from Arabidopsis with 76.67% of identity
• Blastx: Xanthine dehydrogenase 1 from Arabidopsis with 76.9% of identity
• Eggnog: xanthine dehydrogenase(COG4630)
• Kegg: Link to kegg annotations (AT4G34890)
• CantataDB: Link to cantataDB annotations (CNT0001190)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448314.1)
• Pfam: [2Fe-2S] binding domain (PF01799.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;