Ll_transcript_352811

• Id Trinity: TRINITY_DN49406_c0_g5_i2
• Name Transcript: Ll_transcript_352811
• Sequence: AGAGTCATACAGTGGACAAACAAGTGGATGTTCAAGAATATGACTCATTGAATATGATTCTATTTTGGCAACTTGGTCTTTTGCTTAGTTAATCTTTCAC AATCACTGCATGTTATTTTGTATGATGCACAACTCTAAGTGGGATACAGAGGGGAGTATACTATGATGGGAGTTGAATAAAGGGCTTGTTTTTATGTCAT AATTTTTCCTCTAAAGCCCTTGGCACATGCAACTAGAATTTCCCTCAGAAAAAACCATGTAAGATCCAGTGTTCATATGGACGTATTGAAAACTTTATTT TATGACAATATTGGCACTGAGAAGGATTCTCAAATTAGACAACTTGAGAAAGAGGATTATCAATATGCTCAGATGGTTCCCTTCCTCCGATGTTGACAGT GAAAATGGTTGACCATTTATTCCTTTTTTATTCTGTTACAAGATAATTGTGAGAGCTGGTATTTTCTTCATCCGTCTGTTGTGTTATGCCTTGACCTATG GAAGGAATTAATTATATATTACTTTATTAAAAAAATTTCATTACTATTATAACATTTATGGGGAAGGACATTGATTAGGTCCAGGGATTGTGGTGTCACA AATGGCACTGCCTTGTGTTACCTGTAATCTGTGGCTTGAGAGAATTTACTGCATTAATAATATTGTGTTATTGCAGGCACCTCAGAAGCACCAGAAATAT GTTTCTCATGTTCTTGGTCTTCCCATGTCCAAGGTAGTGTGCAAAACAAAACGAATTGGTGGCGGATTTGGGGGGAAGGAGACAAGATCAGCCTTTATTG CTGCTGCAGCTTCAGTCCCAGCATATCTGTTAAACCGGCCTGTAAAAATCACACTGGACCGAGATGTAGACATGATGATAACTGGGCAACGCCATAGTTT TCTAGGGAAGTATAAGGTTGGATTTACAAATGAAGGGAGGGTGCTCGCACTAGATCTTGAAATTTATAACAATGCTGGAAATTCACTGGATCTCTCACTT GCTATCCTTGAACGTGCTATGTTTCATTCAGATAATGTGTATGAAATACCTAATATGAGAATAATTGGAAGGGCCTGCTTCACTAATTTCCCTAGCCACA CTGCTTTCCGTGGATTTGGTGGTCCTCAAGGCATGCTCATTACTGAAAACTGGATCCAAAGGATTGCTATGGAACTCAAGATGAGCCCAGAAAAGATAAG GGAAATTAACTTTCAAGGTGAAGGATCTGTTACGCATTATGGCCAGCAACTTCAGTACTGCACGTTAGCCCAGCTTTGGAATGAACTTAAGTTATCCTGT GACTTTGTGAAGGCACGTGAAGAAGTTGACCAGTTCAATGCTCATAACCGTTGGAAGAAGCGTGGCATTGCTATGGTTCCAAATAAGTTTGGTATATCCT TTACAACAAAGCTTATGAACCAGGCAGGTGCTCTAGTTCATGTCTATACAGACGGAACTGTTTTAGTTACCCATGGGGGTGTAGAAATGGGGCAAGGTCT GCATACAAAAGTTGCCCAGATTGCTGCATCAGCTTTCAGTATCCCCCTTAGTTCTGTCTTTATATCAGAAACAAGTACTGACAAGGTTCCTAATTCTTCT CCAACAGCAGCTTCCGCAAGTTCTGATATGTATGGAGCAGCGGTTTTAGATGCATGTGATCAAATAAAGGCACGCATGGAACCTATTGCTTCCCAAAATA ACTTTAATTCGTTTGCTGAGTTAGCTAGTGCATGCTATGCACAGCGAATAGACCTTTCTGCCCATGGATTTTACATTACACCTGATATTGGCTTCGATTG GACGACGGGTAAAGGAAAACCTTTTCGGTATTTCACTTATGGGGCTGCATTTGCTGAGGTAGAAGTTGACACCTTGACTGGAGATTTCCACACCAGGGTT GCAAACATTATTTTGGATCTGGGATATTCTTTGAACCCAGCTATTGATGTCGGACAGATTGAAGGAGCTTTTATTCAAGGTTTAGGTTGGGTAGCTTTAG AAGAACTTAAATGGGGAGATGGAGCGCATAAATGGATCCCCTCTGGATTCCTTTACACAGCTGGACCTGGAGCTTATAAAATTCCTTCTATAAATGATGT TCCTTTTAAATTTAATGTCTCACTCCTCAAGGGTCATCCAAATGTTAAGGCCATCCATTCATCTAAAGCCGTCGGCGAACCTCCATTTTTCCTAGCATCG GCTGCGTTCTTCGCCATTAAGGATGCCATCAAAGCTGCTAGAGTTGAGACGGGGCATAGTGGCTGGTTTCCTCTAGATAATCCTGCAACTCCTGAGAGAA TTCGGATGGCTTGTTTAGATGAGTTTACATCTCCCTTTGTTAACTCAGATTTCCATCCCAAACTTAGTGTTTGATGCTCTACTTATTATTCTCAGGATGA TTTTCTTACAATGTTTTTATGTGAATGCTCACAAAGAATGTGTAGCAATGGATATAACACTTTATAGAGAATAATTTATTTCAGGGATCCAAATTATCCC CTTTATGATGTACAATAATTATTGCATGGAATAAACAATATGGCAACTTATTGTGGGCCTATCACATCCCTCTCTGACCCATATTGGTTGCTAAATTTGA TTGCCATAACTAAGGGTCTTAATGTTAAATTACATTTCTATATAATCTATTGAATAATAACCAACAAGGCT
• Tissue: pods
• Gene name: LI_gene_169075;
• Additional information: details;

Expression of Ll_transcript_352811

FPKM

• PAB: 6.1
• PNAB: 0.5
• PS1: 0.1
• PS2: 0.6
• PS3: 1.2
• PW1: 0.4
• PW2: 1.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_352811

• Blastp: Xanthine dehydrogenase 1 from Arabidopsis with 84.1% of identity
• Blastx: Xanthine dehydrogenase 1 from Arabidopsis with 83.25% of identity
• Eggnog: xanthine dehydrogenase(COG4630)
• Kegg: Link to kegg annotations (AT4G34890)
• CantataDB: Link to cantataDB annotations (CNT0001190)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448314.1)
• Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase (PF02738.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;