| Id Trinity | TRINITY_DN49406_c0_g5_i7 |
|---|---|
| Name Transcript | Ll_transcript_352827 |
| Sequence | CTGAAAGAGACCCGGAAATATAGTTAACTGTTTCGATTTACTTATATTAGAACTCAGAAGAACCGCATTAGAACGAAGAAGAATATTCGTTGCAACGAAA ATGGAGTCGTTGAAGAACGATGAAATGTTAGAACAACAATTGAAAGCTCCGTCGATCGAAAACGAAGCTATTCTCTATGTTAATGGTGTTCGTAGAGTCT TGCCTGATGGATTAGCTCATCTCACACTTCTTGAGTATCTCAGAGATGTAGGCCTGACCGGAACTAAACTAGGATGCGGCGAAGGCGGTTGTGGAGCTTG CACTGTTATGGTTTCTCATTATGACAGAAAACTGAGGAAATGCTTACACTATGCTATCAATGCTTGCTTAGCACCTCTATATTCGGTAGAAGGGATGCAT GTGATTACAGTGGAGGGTTTGGGAAGTTGCAAGCGCGGATTGCACCCGATCCAGGTCATACATGCACATACTATTTTCTTTTATGATGCTAGTCCACTTG GTTTTTTCACAGAATACTGTAACACCGTTTGATTCATGCAGCTGACCCCATCTTGTGGGGAAAGGCTTTGATTATTATTGTTGTCCTTTTGGCGTTTGCT ACTGTTTTGAGTATCCTTTATTTGTTTGGTTCTCATGTTGTGATACATTTATGGGCTTAGCCTTTGATTATTATTGTTGTCCTTTTGGCGTTTGCTATTG TTTTGAGCATCCTTTATTTGTTTGGTTCTCATGTTGTGATACATTTATGGGCTTAGCCTATGTGTTTTCTCATATTTTTAATTTGGATTTACTCGTTAAT ACTTTGAACCTACCCTTGTAATGTAATCTCTCCAGGAATCGTTGGCACGCAGTCATGGTTCGCAATGTGGATTTTGTACACCCGGTTTTATCATGTCCAT GTATGCATTATTGCGGTCAAGTCAAACACCACCTACTGAAGAGCAAATTGAAGAAAGCCTGGCAGGGAATTTATGCCGATGCACTGGTTACAGACCAATA CTTGATGCATTCCGTGTCTTCTCCAAAACTAATGATATCTTATATACTGGGGTGTCTTCATTGAGCCTTCAGGAAGGCAAATCTATTTGCCCATCAACCG GAAAACCGTGTTCATGTAATTTAAACAATGTGAGTGATAAGCATATAGTCAGTGATGATAGATATATACCTACTTCCTTTAATGAAATAGATGGGACCAA GTATACAGAAAAGGAGCTTATTTTTCCTCCTGAGCTGTTGTTAAGGACACCAAACTCCTTAAATTTGACTGGGTTTGGTGGACTAATGTGGTTTCGGCCT TTAGCGCTTCAACATGTACTGGATCTAAAAGCCAAATATCCCAGTGCGAAGTTGGTAGTTGGTAACACTGAGGTGGGAATTGAGATGAGACTAAAGAGAA TGCAATATCGGGTTCTGATCTCTGTTATGCATGTGCCAGAACTAAATGCGTTGGATATAAAAGATGATGGATTAGAGATGGGTGCTGCAGTAAGACTATC TGATCTCTTGAATATATTCAGAAAGGTTGTAAGTGAACGAGCTTCTCATGAAACTTCGTCTTGTAAGGCCTTTATTGAGCAACTGAAATGGTTTGCCGGG ACACAGATAAGAAATGCTGCATCAGTTGGTGGGAATATATGTACCGCCAGTCCAATATCAGATTTGAATCCTCTCTGGATGGCTTCTAGAGCAAAGTTTC AAATTATTGACTCCAAAGGAAACATCAGGACGGTAATGGCAGAAAATTTCTTCCTAGGTTATCGTAAGGTGGATTTGGCAAGTGATGAAATCTTGCTATC AATATTCTTGCCTTGGAGTAGGACCTTGGAGTTTGTGAAAGAATTTAAGCAATCTCATAGAAGGGATGATGACATTGCAATCGTAAATGCAGGAATGCGT GTTCATATTCAGGAACATAGTGAAAAGTGGGTGGTTGCTGATGCATCAATTGTTTATGGTGGGGTGGCTCCATTTTCACTTTCTGCGACAAAAACTAAGG AATTTCTCATAGGAAAGACTTGGGGCCAAGATATGCTGCAAAATGCAGTAAAAGTCCTACAAAATGATATATCACTCAAGGAAGATGCTCCTGGTGGAAT GGTAGAGTTTCGGAAATCTTTAACTACAAGTTTCTTTTTTAAATTTTTTCTGTGGGTGTCTCATCAAATGGATGGCATCAAAGAGAGTATACCACTTTCC CATCTATCTGCTGTGCTCCCAGTCCACCGCCCACCAGTTGCAGGGGCTCAAGACTATGAAATCATGAAACATGGGACATCTGTGGGTTCTCCTGAGGTTC ATCTATCTGCAAGACTTCAGGTTACAGGAGAAGCAGAATATGCTGATGACATACAACTACCTCCTAATGGTTTGCATGCAGCCCTAGTTCTGAGCAAAAA ACCCCATGCCCGAATTCTTTCAATTGATGAGTCAGGGGCGAAGTCTTCACCTGGATTCGCGGGATTATTTCTCGCCAAAGATGTACCATGTGATAATAAA ATTGGAGCAGTTGTTGCTGATGAGGAGCTTTATGCTACAGAATACATCACTTGTGTGGGTCAGGTTATAGGAGTAGTTGTAGCTGATACTCATGAAAATG CAAAGATAGCAGCAAGAAAAGTTCATGTTGAGTATGAAGATCTCCCAGCCATCCTGTCAATACAGGATGCCATCAATGCTAGAAGTTTTCATCCCAACAC AGAGAAGTGTTTGAGTAAAGGTGATGTTGATCACTGTTTTCAGTCAGCTCAGTGTGATAGAATAATTGAAGGGGAAGTTCAGATAGGAGGTCAGGAACAC TTTTATCTGGAACCACATAGCAGTGTGATATGGACAATGGATGGTGGAAATGAAGTTCACATGGTATCATCGACTCAAGCACCTCAGAAGCACCAGAAAT ATGTTTCTCATGTTCTTGGTCTTCCCATGTCCAAGGTAGTGTGCAAAACAAAACGAATTGGTGGCGGATTTGGGGGGAAGGAGACAAGATCAGCCTTTAT TGCTGCTGCAGCTTCAGTCCCAGCATATCTGTTAAACCGGCCTGTAAAAATCACACTGGACCGAGATGTAGACATGATGATAACTGGGCAACGCCATAGT TTTCTAGGGAAGTATAAGGTTGGATTTACAAATGAAGGGAGGGTGCTCGCACTAGATCTTGAAATTTATAACAATGCTGGAAATTCACTGGATCTCTCAC TTGCTATCCTTGAACGTGCTATGTTTCATTCAGATAATGTGTATGAAATACCTAATATGAGAATAATTGGAAGGGCCTGCTTCACTAATTTCCCTAGCCA CACTGCTTTCCGTGGATTTGGTGGTCCTCAAGGCATGCTCATTACTGAAAACTGGATCCAAAGGATTGCTATGGAACTCAAGATGAGCCCAGAAAAGATA AGGGAAATTAACTTTCAAGGTGAAGGATCTGTTACGCATTATGGCCAGCAACTTCAGTACTGCACGTTAGCCCAGCTTTGGAATGAACTTAAGTTATCCT GTGACTTTGTGAAGGCACGTGAAGAAGTTGACCAGTTCAATGCTCATAACCGTTGGAAGAAGCGTGGCATTGCTATGGTTCCAAATAAGTTTGGTATATC CTTTACAACAAAGCTTATGAACCAGGTAATACTTCAATTTATAGTTCTTTTTTGTTGAAAAAGGAAAAGGAAATTGTGGTTTCAACTGAGGTTGGAGGAA TTCCAGGGAGGGATAAAGGGCAGTTTGTCAAGATTGTCTTTTATGTTTTTGCGGAAACAATGTACCTGGCATAAGACTGGGTAGCTGCTGTTAGGGAGAG GTCCAGAGCATGTTTCTAAATATATATCTCATCATCCTCATTAAATTTCTACTTCTTTTCCCTTCATTTTTTTGCGTGTTTCATTGTGTACTACTAACAT CAAGCTTTCTCTAAACAAGTATTTAACTAAAACTTTGCTGTAGTTTTGTAGTCTAGCTAGGTAATATACTACTATACTTGAAATAGGTTAAAAGGTTACT TATCATCTAATTCAAGTCTTTGGTCCCTTTAAGCACCGGCATACTTTCTACCTCTCTTGATGCAGAGAAAGTAGATAAAGAGAAACTTTTAGAGAGAATT ATGGTTAATAGTTGGGGGAAATGAAGTAGGAATGAGAGGACTATGGTGTAGAGTTATTAACCACTTCAAATATGAAAGTATAGCATATAATGGCTGAATC GAGGTACTTAAAGGTAAGTGCTATCTATGCTAGAAATACGAGATTAACTGATTAAACATATATTACTAAGCCCAGCCAACACAAGTTCTATGATGGCAGT CATGCGATTACTTTATACAATGAGAATGAAGAACTGCGATAAAACAAAATAGAAAAAAATAACTCATAAAAAAGGAGAAGAGCTTAACAGGATTAAGTTC CATTTCATTATAGTATATGATCTTTTGTTACAAAGTTCATTTGAGTGGTAGGATATTGATCTACATTACTTGATTAGAAATTTTGCTTTATATTTTTGTG GAGATTTTCTTTCAAAATGTTCTTTTGCTTTATATTCCTTTTTTGTTAACTATGAAAGAATTGCATTATTAGAATTGTGATACTTATGCACTTCATATTT TCTTTATAACTATAGGCAGGTGCTCTAGTTCATGTCTATACAGACGGAACTGTTTTAGTTACCCATGGGGGTGTAGAAATGGGGCAAGGTCTGCATACAA AAGTTGCCCAGATTGCTGCATCAGCTTTCAGTATCCCCCTTAGTTCTGTCTTTATATCAGAAACAAGTACTGACAAGGTTCCTAATTCTTCTCCAACAGC AGCTTCCGCAAGTTCTGATATGTATGGAGCAGCGGTTTTAGATGCATGTGATCAAATAAAGGCACGCATGGAACCTATTGCTTCCCAAAATAACTTTAAT TCGTTTGCTGAGTTAGCTAGTGCATGCTATGCACAGCGAATAGACCTTTCTGCCCATGGATTTTACATTACACCTGATATTGGCTTCGATTGGACGACGG GTAAAGGAAAACCTTTTCGGTATTTCACTTATGGGGCTGCATTTGCTGAGGTAGAAGTTGACACCTTGACTGGAGATTTCCACACCAGGGTTGCAAACAT TATTTTGGATCTGGGATATTCTTTGAACCCAGCTATTGATGTCGGACAGATTGAAGGAGCTTTTATTCAAGGTTTAGGTTGGGTAGCTTTAGAAGAACTT AAATGGGGAGATGGAGCGCATAAATGGATCCCCTCTGGATTCCTTTACACAGCTGGACCTGGAGCTTATAAAATTCCTTCTATAAATGATGTTCCTTTTA AATTTAATGTCTCACTCCTCAAGGGTCATCCAAATGTTAAGGCCATCCATTCATCTAAAGCCGTCGGCGAACCTCCATTTTTCCTAGCATCGGCTGCGTT CTTCGCCATTAAGGATGCCATCAAAGCTGCTAGAGTTGAGACGGGGCATAGTGGCTGGTTTCCTCTAGATAATCCTGCAACTCCTGAGAGAATTCGGATG GCTTGTTTAGATGAGTTTACATCTCCCTTTGTTAACTCAGATTTCCATCCCAAACTTAGTGTTTGATGCTCTACTTATTATTCTCAGGATGATTTTCTTA CAATGTTTTTATGTGAATGCTCACAAAGAATGTGTAGCAATGGATATAACACTTTATAGAGAATAATTTATTTCAGGGATCCAAATTATCCCCTTTATGA TGTACAATAATTATTGCATGGAATAAACAATATGGCAACTTATTGTGGGCCTATCACATCCCTCTCTGACCCATATTGGTTGCTAAATTTGATTGCCATA ACTAAGGGTCTTAATGTTAAATTACATTTCTATATAATCTATTGAATAATAACCAACAAGGCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_169075; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352827
| Blastp | Xanthine dehydrogenase 1 from Arabidopsis with 74.4% of identity |
|---|---|
| Blastx | Xanthine dehydrogenase 1 from Arabidopsis with 74.76% of identity |
| Eggnog | xanthine dehydrogenase(COG4630) |
| Kegg | Link to kegg annotations (AT4G34890) |
| CantataDB | Link to cantataDB annotations (CNT0001190) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448314.1) |
| Pfam | [2Fe-2S] binding domain (PF01799.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |