Id Trinity | TRINITY_DN49406_c0_g5_i9 |
---|---|
Name Transcript | Ll_transcript_352832 |
Sequence | AAAAAACCCCATGCCCGAATTCTTTCAATTGATGAGTCAGGGGCGAAGTCTTCACCTGGATTCGCGGGATTATTTCTCGCCAAAGATGTACCATGTGATA ATAAAATTGGAGCAGTTGTTGCTGATGAGGAGCTTTATGCTACAGAATACATCACTTGTGTGGGTCAGGTATATGGCTTACTGAATAGTATCTCAAGTTT GACCTGTTTATAATTTTGACCTTGTCTCTCTTGAGATTCTTTGATGCCATTTCTTGTCTTGAGATCAATTTGGCAAAAAGTGGTCAGTAGGGAGTAATAG TGGACAAGTCAAATTCTTATCAAAATTGTCTCTTTTGAATCTTCAAATGCTCCATCAACCTCTCACTTATCCTGGCATTCCTTTGACTGGTTATCATTGT GCCTTGTCCTTCTGGGACCTGTTGAGTTGCAAGATTCAAGAGGCTAGATTGTTGGAAGTGTTTTTTTTTCTTTGGTCGGTAAGAGCACATTTATCCACTT GTGCTTGTCTAGAACCCCCTTATATTTTTTTCTCCATTTTCTGAATACCCATGGCTGTAGCTTAGAAAATGTATAGTTATATGGGATCTCCTTTGGTCAG GGGCTGGGGATTCTAGTAGAGGCCACCTAGTTTGTTGGAAGTTTTGTTGTGCACTAAAGAAACAGGGGGGTTGGGCCCTGGTAATTTGGTACCCAAGAAC ATTGCTTTAGAAACTAAGTGACTTTGGCGTTTACCTCTCCATTTTTCTTCTTTATGGTGTCAAGTTATTCGAAGTAAGTATGATTTGCATCTGACTATAT GGGCGACCAATTATGCGAATGGAGTTTCTCATTTTATTACTTGGAAATTTGTTTCTCATTGTTTAGATTCGTTTAATTATCTCTTTTCCTTTTGGGTGAC GACTCTTGTATTACTTTTTGAGGGTGTGCATCAACACAACAGTGAGGTTGCTTGTCTTGTGACCTGAAGGTCACGAGTCAACTCCTGGAAACAATCTCTT CATTTGCAAGGGTAAGACTGCATACATCTACCCTCCCCAGATCCCACTAAGTGGGAGCCTCATGCATTGAGCCGCATTTTATTCATCTTTGCACACTATT ACCTTTTCTGAGGCTTTTCCAAGATTTTTTGCTCTGTCTTTTATGCATAATTCTCCCGTTTGTCAATTTTTTTCTCACTAACTTTTCTTAGAACATTTTC TGTTTCAGAATTTGGCATGACAAAGAGACTAGTGAGCCTGAGTCTCAGCTCATTTTACTTGACTCAATATATGCATCCTTTTGCTTTTTACTCTAGAATT TGGACTCTTGAATCATTTTGAATTTTCTCTTGTAAATCCTACTTTCTGCATGTCTTCAGGTTATAGGAGTAGTTGTAGCTGATACTCATGAAAATGCAAA GATAGCAGCAAGAAAAGTTCATGTTGAGTATGAAGATCTCCCAGCCATCCTGTCAATACAGGATGCCATCAATGCTAGAAGTTTTCATCCCAACACAGAG AAGTGTTTGAGTAAAGGTGATGTTGATCACTGTTTTCAGTCAGCTCAGTGTGATAGAATAATTGAAGGGGAAGTTCAGATAGGAGGTCAGGAACACTTTT ATCTGGAACCACATAGCAGTGTGATATGGACAATGGATGGTGGAAATGAAGTTCACATGGTATCATCGACTCAAGCACCTCAGAAGCACCAGAAATATGT TTCTCATGTTCTTGGTCTTCCCATGTCCAAGGTAGTGTGCAAAACAAAACGAATTGGTGGCGGATTTGGGGGGAAGGAGACAAGATCAGCCTTTATTGCT GCTGCAGCTTCAGTCCCAGCATATCTGTTAAACCGGCCTGTAAAAATCACACTGGACCGAGATGTAGACATGATGATAACTGGGCAACGCCATAGTTTTC TAGGGAAGTATAAGGTTGGATTTACAAATGAAGGGAGGGTGCTCGCACTAGATCTTGAAATTTATAACAATGCTGGAAATTCACTGGATCTCTCACTTGC TATCCTTGAACGTGCTATGTTTCATTCAGATAATGTGTATGAAATACCTAATATGAGAATAATTGGAAGGGCCTGCTTCACTAATTTCCCTAGCCACACT GCTTTCCGTGGATTTGGTGGTCCTCAAGGCATGCTCATTACTGAAAACTGGATCCAAAGGATTGCTATGGAACTCAAGATGAGCCCAGAAAAGATAAGGG AAATTAACTTTCAAGGTGAAGGATCTGTTACGCATTATGGCCAGCAACTTCAGTACTGCACGTTAGCCCAGCTTTGGAATGAACTTAAGTTATCCTGTGA CTTTGTGAAGGCACGTGAAGAAGTTGACCAGTTCAATGCTCATAACCGTTGGAAGAAGCGTGGCATTGCTATGGTTCCAAATAAGTTTGGTATATCCTTT ACAACAAAGCTTATGAACCAGGTAATACTTCAATTTATAGTTCTTTTTTGTTGAAAAAGGAAAAGGAAATTGTGGTTTCAACTGAGGTTGGAGGAATTCC AGGGAGGGATAAAGGGCAGTTTGTCAAGATTGTCTTTTATGTTTTTGCGGAAACAATGTACCTGGCATAAGACTGGGTAGCTGCTGTTAGGGAGAGGTCC AGAGCATGTTTCTAAATATATATCTCATCATCCTCATTAAATTTCTACTTCTTTTCCCTTCATTTTTTTGCGTGTTTCATTGTGTACTACTAACATCAAG CTTTCTCTAAACAAGTATTTAACTAAAACTTTGCTGTAGTTTTGTAGTCTAGCTAGGTAATATACTACTATACTTGAAATAGGTTAAAAGGTTACTTATC ATCTAATTCAAGTCTTTGGTCCCTTTAAGCACCGGCATACTTTCTACCTCTCTTGATGCAGAGAAAGTAGATAAAGAGAAACTTTTAGAGAGAATTATGG TTAATAGTTGGGGGAAATGAAGTAGGAATGAGAGGACTATGGTGTAGAGTTATTAACCACTTCAAATATGAAAGTATAGCATATAATGGCTGAATCGAGG TACTTAAAGGTAAGTGCTATCTATGCTAGAAATACGAGATTAACTGATTAAACATATATTACTAAGCCCAGCCAACACAAGTTCTATGATGGCAGTCATG CGATTACTTTATACAATGAGAATGAAGAACTGCGATAAAACAAAATAGAAAAAAATAACTCATAAAAAAGGAGAAGAGCTTAACAGGATTAAGTTCCATT TCATTATAGTATATGATCTTTTGTTACAAAGTTCATTTGAGTGGTAGGATATTGATCTACATTACTTGATTAGAAATTTTGCTTTATATTTTTGTGGAGA TTTTCTTTCAAAATGTTCTTTTGCTTTATATTCCTTTTTTGTTAACTATGAAAGAATTGCATTATTAGAATTGTGATACTTATGCACTTCATATTTTCTT TATAACTATAGGCAGGTGCTCTAGTTCATGTCTATACAGACGGAACTGTTTTAGTTACCCATGGGGGTGTAGAAATGGGGCAAGGTCTGCATACAAAAGT TGCCCAGATTGCTGCATCAGCTTTCAGTATCCCCCTTAGTTCTGTCTTTATATCAGAAACAAGTACTGACAAGGTTCCTAATTCTTCTCCAACAGCAGCT TCCGCAAGTTCTGATATGTATGGAGCAGCGGTTTTAGATGCATGTGATCAAATAAAGGCACGCATGGAACCTATTGCTTCCCAAAATAACTTTAATTCGT TTGCTGAGTTAGCTAGTGCATGCTATGCACAGCGAATAGACCTTTCTGCCCATGGATTTTACATTACACCTGATATTGGCTTCGATTGGACGACGGGTAA AGGAAAACCTTTTCGGTATTTCACTTATGGGGCTGCATTTGCTGAGGTAGAAGTTGACACCTTGACTGGAGATTTCCACACCAGGGTTGCAAACATTATT TTGGATCTGGGATATTCTTTGAACCCAGCTATTGATGTCGGACAGATTGAAGGAGCTTTTATTCAAGGTTTAGGTTGGGTAGCTTTAGAAGAACTTAAAT GGGGAGATGGAGCGCATAAATGGATCCCCTCTGGATTCCTTTACACAGCTGGACCTGGAGCTTATAAAATTCCTTCTATAAATGATGTTCCTTTTAAATT TAATGTCTCACTCCTCAAGGGTCATCCAAATGTTAAGGCCATCCATTCATCTAAAGCCGTCGGCGAACCTCCATTTTTCCTAGCATCGGCTGCGTTCTTC GCCATTAAGGATGCCATCAAAGCTGCTAGAGTTGAGACGGGGCATAGTGGCTGGTTTCCTCTAGATAATCCTGCAACTCCTGAGAGAATTCGGATGGCTT GTTTAGATGAGTTTACATCTCCCTTTGTTAACTCAGATTTCCATCCCAAACTTAGTGTTTGATGCTCTACTTATTATTCTCAGGATGATTTTCTTACAAT GTTTTTATGTGAATGCTCACAAAGAATGTGTAGCAATGGATATAACACTTTATAGAGAATAATTTATTTCAGGGATCCAAATTATCCCCTTTATGATGTA CAATAATTATTGCATGGAATAAACAATATGGCAACTTATTGTGGGCCTATCACATCCCTCTCTGACCCATATTGGTTGCTAAATTTGATTGCCATAACTA AGGGTCTTAATGTTAAATTACATTTCTATATAATCTATTGAATAATAACCAACAAGGCT BLAST |
Tissue | pods |
Gene name | LI_gene_169075; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_352832
Blastp | Xanthine dehydrogenase 1 from Arabidopsis with 82.03% of identity |
---|---|
Blastx | Xanthine dehydrogenase 1 from Arabidopsis with 83.38% of identity |
Eggnog | xanthine dehydrogenase(COG4630) |
Kegg | Link to kegg annotations (AT4G34890) |
CantataDB | Link to cantataDB annotations (CNT0001190) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019448314.1) |
Pfam | Molybdopterin-binding domain of aldehyde dehydrogenase (PF02738.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |