Id Trinity | TRINITY_DN49409_c1_g1_i1 |
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Name Transcript | Ll_transcript_354646 |
Sequence | CTCATTTTTTTTTTTTTTTTTTACTTACTTTTTATTACTATTCATAGCGATTATCTGTTCAAGCCACTCCGATTCACGGATGATTCCTATCAGGATAGCT ACATAATTACGATTGGAGTTTATTTCCTCTATTACAAGCAGTTACTATAGAGGAGCACATGGAATCATTATTGTGTATGATGTTACTCACATGGAGAGCT TCAACAATGTCAAACACTGGTTGCATGAGGTTGATGGGTATGCTCATCACTCTGTCTCCAAGCTTCTCCTAGGCAACAAATCTCATCTCCTTCATAACAA CCTTCTCAACACTCAAACTGATAAGCAAAACGGTGTGTTTAAAGCTCAAAAGTTAAAGAGGGCGCAAGTGGGTGGGGTGGCACAATCGTGTTTGTCTTGC TGGTGAATCAAGCCGATAGTCGAGAGATTTTAGGAGCACAGGGTATCTTAAGTTGGTTGCTGCAAAAATATATATATATATATATAATTAATGTCTGAAG AGGCTGGATCCATGTTCGTAGTTTATGATGATACAAGCAGTACAGAGGAATCTCCTCATCAAACTAGCCTCTCCTTGGAAACAACTAATGATGCTATTCC TTACATTGGTCAAAGGTTTCCCACTCATGACGCTGCTTATGAATTCTATACTGAATTTGCCAAGAGTTGTGGCTTCTCAATTCGACGTCACCGCACAGAG GGGAAAGATGGTGTTGGTAAAGGACTTACTAGACGCTACTTTGTTTGTCATCGTGCTGGAAACACTCCTGTCAAAACTTCAACCGAAAGTAAACCCCAAA GGAATAGAAAATCTTCTCGATGCGGATGCCAGGCTTATATGCGGATAAGCAAGACAACGGAATCTGGAGCCCCAGAATGGCGTGTGACTGGTTTTGCAAA CCACCATAATCATGAACTTCTAGAACCAAACCAAGTTCGATTTCTTCCTGCATACAGAACTATTTCTGATGCCGACAAAAATCGAATCCTTATATTTGCC AAAACAGGGATCTCTGTTCATCAAATGATAAGGCTCATGGAGCTCGAGAAGTGTGTGGAACCTGGATATTTGCCCTTTACTGAAAAGGATGTAAGGAATT TACTACAGTCATTTAGGAAATTAGATCCAGAAGAAGAAAGCTTAGATTTATTAAGAATGTGCAGAAACATTAAGGACAAAGATCCTAATTTTAAGTTTGA GTATACACTTGATATAAACAACCGTTTGGAGAACATTGCCTGGTCATATGCCTCGTCAATCCAGTTGTATGATATCTTTGGTGATGCAGTGGTGTTTGAT ACAACACACCGCCTGACTGCATTTGACATGCCACTTGGGATATGGGTTGGTATGAATAATTATGGAATGCCTTGCTTTTTTGGCTGTGTGCTTCTGCGAG ACGAAACCATGAGGTCATTCTCCTGGGCACTGAAGGTTTTCTTAGGTTTTATGAATGGGAAAGCTCCACAGACTATATTAACTGACCAAAATATATGTCT CAAAGAGGCACTATCTATGGAAATGCCAACAACAAAACATGCTTTCTGCATATGGATGATAGTGGCAAAGTTTCCATCTTGGTTTAATGCTGTTCTAGGA GAGCGTTACAATGAGTGGAAGGCTGAATTTTATAGGATCTATAATCTTGAGTCAATTGAGGATTTTGAACTAGGCTGGCGAGAAATGGTTTGTTCTTTTG GGCTGCATTCCAACCGGCACATGGTTACTTTATATAGCTCACGCTCATTTTGGGCGTTGCCATTTTTAAGAAGCCATTTTCTTGCGGGAATGACTACAAC TGGTCAGTCAAAGTCAATTAATGCTTTCATTCAACGGTTTCTAAGTGCACAGACTCGACTTGCACATTTTGTTGAACAGGTAGCTGTTGCTGTGGATTTT AAAGACCAAACTGGAGAACAACAAACCATGCAGCAGAATCTACAAAATGTTTGCCTCAAAACTGGAGCCCCCATGGAATCACACGCTGCCACAATTCTCA CTCCTTTTGCCTTTTCAAAGCTTCAAGAACAACTTGTGTTGGCTGCACATTATGCTTCTTTTCCAATTGAAGATGGTTTTCTTGTTAGGCACCACACAAA AGCCGAGGGAGGTAGGAAAGTTTATTGGGCCCCTCAGGAAGGAATTATTAGTTGCAGCTGCCACCAGTTTGACTTCTCTGGAATTTTATGTAGGCATTCT CTAAGAGTTCTTTCCACAGGAAATTGTTTTCAGATCCCAGATAGGTATCTTCCCATTCGTTGGCGTCGTATCAGTATGCCCTCTTCTAAGCTTCTTCAGA GTGCACCTAATGATCATGCTGAAAGAGTTCAATTATTGCAAAATATGGTTTCATCTCTGATAACGGAATCTGCAAAGTCTAAGGAACGATTAGATATTGC AACAGAACAAGTTTCCAATCTTTTGTCTCGCATAAGAGAGCAACCGATTTCATTACAAGGTGTCAAAGATGTTTCTTCCATCAATAGGAATGTGTGACTC TAGGATAAAAAGATATGGTCATAGGGCTTGAAATTATTCTTCTGCAGTGACATTCCTGTAGATCGGAAAAAACGAAGTTGCAGTGTATCACATGACTGTA CAGTATAAAATTTTGTTCATATGCATCCTCGTATTATGTCATTGTTAAAAATTTGAAGACACGGTGTTTGTATTGGAATTGTACTGTAAGAACCCTCTCA ATACAAAGATGCCACCAAAATGAGCCAGCGATTGGTGAATGCTACATGTCTAAAATCTGGCTAAACTTCTTTTTGCCCCTTCAACCCATGACCCATCATG TTGCCTTTCCAATCTAGGAATGGCATTGGCAACATCTTTTGACATATTTCATGCTAGAGGCTTGTGAGTTTTGAGTAGCTATGACCATGTGAGTCGAGTG TCCTTTACATTACTTTGGATTCCCAACTGTTCCAGATGAATGAAGTCCACAACCTCATCCAAAATCAACAAAAAATTCATTGTATGCAGCATCTGGGTAT CATTGACCAAAATGTAGTATGCATATTTTGCTGACTACCTCCAAAAACCACCACTTCAGCTTCTTGCTCTACTTTACTGAGATGTCAATGGGTGTGTCAA CATGTTGTTTAACCTTGAGCAAGAATTCAATAACAAATTCTCTATATCTTATTTTAGATTACAAATTTTCATATGCCATAGCATGAGTTCCTAAGCATTG AGTATGAGATGTTTTGGATTTTGTTTTGAACTTATCTGCAGGATGGTAAGCCAGCCAAGTCCTAGTAAGTGAGGCGAGCCTGTTCAGATGAAGGGGCAAC CAATCCCACAGAAGAGCAACTGTTGTGGTTAAGTAAAACTTGTAATGTTCTACTTTTTATTAACTGTTATTGTACCCAAAAAATAGAGACCCTACCCTGT GTTCTGGATTCTGATATGGATTTTTCTATAACAGTTTAAATATCATGTATTGGAATCCTTGGATAAAATGTAGTTCTAGATGACTTCTCAAGTGTAGAAT AAAAGAGAAGCAATTTCTCTGTTAGTTTTAGTTCTTTGCAGACATAAAGTTTTTCCCATTTGTTAGGGGCATGCTTCTCTTGTGTATTATATGATTAACC CATTTGTTTATTCCGAAGAGATATTTTGAAAATTAAATTGTGAATATTAAAGTTATGGTTGGATATCCAATTTTAGTTATTTAAATCTTATGTATATACT TCAAGCATCGAGTTTACGCAAAAGAAAAAAAGATAATGGGAATTGTTTCTAAACAATGAATTTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_169096; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354646
Blastp | Protein FAR1-RELATED SEQUENCE 11 from Arabidopsis with 77.32% of identity |
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Blastx | Protein FAR1-RELATED SEQUENCE 11 from Arabidopsis with 77.32% of identity |
Eggnog | protein FAR1-RELATED SEQUENCE(ENOG410YDZ2) |
Kegg | Link to kegg annotations (AT1G10240) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440413.1) |
Pfam | FAR1 DNA-binding domain (PF03101.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |