Ll_transcript_354475

• Id Trinity: TRINITY_DN49411_c2_g1_i3
• Name Transcript: Ll_transcript_354475
• Sequence: TGGATCCTTATAAGACATTAAGGATTCAACCTGATGCTTCTGAATCTGATGTTAGGAAAGCTTTTAGAGAACTTGCTTTGAAGGTTTGTTTCATCAATCT TATGTTTCATGGTTTTGATTTTGATTCATATGCAAATGTTTTTTTATTGTTCTTTTTTTTATCGGTAAATTTGTTAATATGTTAGTATATTTATTGTGCA TGAGCACTTCAACCTCATTCATCTTAATCATCAAACCACTTTATAACTTTATTTTGTTGATGGTGGACTCGAATCTATAACCTCCTGCACTCATGTCCTT GCGATTATCTTCACCATCATATAACTCCCATTATTGTTCTTTGATCCTGAAAAATGAATGAAAAAACACATTGATTATCAAAATCTCATGATGGTCAAAT AAGTGGACTAAATTGTGTCTAGAATTAATTAATTTGATCATCATATAAATTTTTTAGAATGAATTTGAGTTTCATTTTAAATTTTTTGGACCAATGTGAG ATATTATGGTCTTACATAATATAAGATTAACATGTATGTCGGTGGTTAATGATTAATCTATTAAACATTCAATATAAGAATATACATGGTTAATTAAAAT GTATACATACTCGTTTCAAATATGTATAAATTTGTCTAAGCTAACTGTTATGGAATGTATCCTGAATTTAAGGGCTTTTTTTTAATTTCAAAGATTTGAT TAAAATTTTGTATGGTTTTTATGTCTTTAACCCTGTACCAAGTCAATCACAATGAAAAATAAATAAATAAATTCGTTAATGTTTAATTTTTTTAACTGGT GTGTTATATTGTTATTGGCTTGGGACACCAGATCCTTTTCGGATTAATTTGTGGTAAAAATATTGATTACTTGGTATTATTTTGTATTACAGTACCATCC AGATGTATGCAGAGGGAGTAATTGTGGGGTGCAGTTTCACGAAATCAATGAGGCTTATGATGTGAGTTACATAATTTAATTTATTTATTTCAATAGAAAA AATTTCAGTTAGAATATAGTGAATTAAAAACTGATTATTTATTTGCACTACATCACAATCAATTAGAAACTGAAAGCTTTTGGTTTTTTTGCAACTCATT TTATGCTTCTATTATTCATTGGTTGTTAAATGATTGTCACATTTCCCCTAAAATTGACATTAAATTGTAGTGGTTAATTATTTAATTTGAAACTCTTTAT TTAACCATGAACTATTTGTAGCATTTCATCTTAATTTAGCCATAAAGTTTTTAGCACAATTTTGAAACTCTTTATTTAGCCATGCACTAGTTTATAACAA GATTTTGACTCTATCGGAAAAGGAGTCCACTGCATAAGGTTCTCACTTAGCTGGATGTACGCAACCTTACTTCCGTAACCGATAGACCATTTTCAGGACC TCATAACCACTTACTAAATAACAACCTTTTACCATAGTAGAGAGACTATTTTCAGGACATCATAACCACTTCCGAAACAACAACCTTTTAGTATAACAGA AAGGTTGTTTTCAGAATTTGACCCCAACCTTATAGTCTGTCGCTAAGTAACAATTTTACTGTAACACCTAACTCAATTGTTGAATTCAGGTTGTAATGGC TAATTTAAGAGGAGAATCAAATGAGACACAAGTGTATGAAGAAGCATATGATGCAGGAATTGATGAGCCATTAAGGGGAATGAATGATCCAGATTGGGAC ATGTGGGAAGAATGGATGGGTTGGGAAGGAGCAGGAATTCGTGACTATTCATCTCACATTAATCCTTACATTTGAAATTTGTCTAAATTATTAGTCGGAA AATGACATATTCTCCTACGCTAATAATGCTCGTATTAGCTCTACCAATCAATTATTGTGCATTGGGTATAGAGAACTTTGGTCCAATTGTACCCACCAAA ACAAAGTGGTTGGTGTTCTTTGTAAATAGTCCATGTGAATATAATAATTTCCCTCTTCATAATTGAAATTGAGGGAGTGACTCTTTGAGTCTTTGTTAAT TCTTATTGTTTTAATAATACTTTGCACACAAATAAAATAAGCTCAT
• Tissue: pods
• Gene name: LI_gene_169106;
• Additional information: -

Expression of Ll_transcript_354475

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.1
• PS2: 0
• PS3: 0.3
• PW1: 0.1
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354475

• Blastp: -
• Blastx: Chaperone protein dnaJ 8, chloroplastic from Arabidopsis with 75% of identity
• Eggnog: ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484)
• Kegg: Link to kegg annotations (AT1G80920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443312.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;