| Id Trinity | TRINITY_DN49411_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_354478 |
| Sequence | AAGGAATAACAAAGTGAATAGGGTTAAGATTTTATGCTCTTATTCTTCTTCTTCTTCTGTTATGGATCCTTATAAGACATTAAGGATTCAACCTGATGCT TCTGAATCTGATGTTAGGAAAGCTTTTAGAGAACTTGCTTTGAAGTACCATCCAGATGTATGCAGAGGGAGTAATTGTGGGGTGCAGTTTCACGAAATCA ATGAGGCTTATGATGTTGTAATGGCTAATTTAAGAGGAGAATCAAATGAGACACAAGTGTATGAAGAAGCATATGATGCAGGAATTGATGAGCCATTAAG GGGAATGAATGATCCAGATTGGGACATGTGGGAAGAATGGATGGGTTGGGAAGGAGCAGGAATTCGTGACTATTCATCTCACATTAATCCTTACATTTGA AATTTGTCTAAATTATTAGTCGGAAAATGACATATTCTCCTACGCTAATAATGCTCGTATTAGCTCTACCAATCAATTATTGTGCATTGGGTATAGAGAA CTTTGGTCCAATTGTACCCACCAAAACAAAGTGGTTGGTGTTCTTTGTAAATAGTCCATGTGAATATAATAATTTCCCTCTTCATAATTGAAATTGAGGG AGTGACTCTTTGAGTCTTTGTTAATTCTTATTGTTTTAATAATACTTTGCACACAAATAAAATAAGCTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_169106; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_354478
| Blastp | Chaperone protein dnaJ 8, chloroplastic from Arabidopsis with 67.57% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ 8, chloroplastic from Arabidopsis with 67.57% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT1G80920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456351.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |