Ll_transcript_354060

• Id Trinity: TRINITY_DN49413_c0_g2_i2
• Name Transcript: Ll_transcript_354060
• Sequence: CACGCTTACGGGTATTTTTTTTTTTTTTTTTCCATTTTTCATTCCCACCTGGTTGATTTTTTTTTTCAATTACTCTCTCTTTCACACACAAAACACAGAC ACAAACACAGAAGAAGAATAAGAATAACAAAACACAAGTATCCAGCTGTTTATGACAAAATTCTGAGGCAATCATGTCAGAAGGTGCAGAAATCAATGAG CGTGTGGACTTTGAGGAGGAAAATTATATGGAAGAAATTGACGACGATGTTGAAGAGCAAATAGACGATGGTGGAGTAGATGGAAGTGAAGATGAAAATG TTGAAGGTAGTGCTGACGAACACGAGGGTGAAGAGTCAGCAGCAGAGGCTGGTGGAAAAGACCAATTGCCTCAAGCGGAAAGAAGCGACATTGCTAATGA ATTTGTCGAAAATGAACAAAAATCATCTTCTGTTAATGAAGTTGAGAAAGAGAAGCACGATGAACTTCTTGCCCATCCTCCTCATGGTTCCGAGGTCTTT ATTGGTGGACTGCCTCGAGATGCACATGAAGATGGTTTAAGGGAATTGTGTGAGTCGATGGGTGACATTATTGAGGTGCGATTAATGAAAGACAAGGACA CCGGAGTAAACAAGGGTTATGCTTTTGTCGCTTTTAAAACAAAAGAGGTCGCCCAAAAGGCCATTGAAGAGATACATAACAAGGAATTTAAGGGTAAAAC TTTGAGGTGTTCTTTGTCTGAAACAAAACACAAATTATTCATAGGTAGTATTCCGAAAACTTTGACAGAGGATGAGTTCAGGAAAGTCCTTGAGAATGTT GGTCCTGGAGTTGAAAACATCGATCTCAAAAAGGACCCTCTGAATCCAAGCAGGAATCGTGGTTTTGCTTTTGTTTCGTATTACAATAATGCTTGTGCTG ATTATTCACGGCAGAAGATGTCTAATGCGAGTTTTAAGCTGGATGGTAGTTCCCCTTCTGTCACATGGGCTGATCCGAAGACCTCACCTGACCATTTTGC TTCTTCACAGGTTAAAGTTCTATATGTGAAAAACATACCTGAGAATGTTAATACGGAACAACTGAAGGAACTATTCCGTCGTCATGGAGAAGTAACAAAA GTAGTCATGCCAGCTGGTAGAGTTGGAGCAAAACGTGATTTTGGTTTCATTCATTATGCGGAGAGGTCAAGTGCATTGGAAGCTATAAAAGATACAGAGA AATATGAAATCGATGGCCAAGAGCTTGAAGTCGTTCTTGCCAAGCCTCAAGCCGAGAAAAAGCATGATGGAGGTTATGCCTACAATCCCGGATTTCATTC AAACCATCCTCCGCATCCCGCGTATGGTGCCTTTTCTGGAAATCTTTATGGCTCCGGAGAGGGTGGATATGGTGTTTCTGCTGGTTATCATCAGCCTATG ATATATGGGCGGGGTCCAATGCCAGTAGGCATGCAGATGGTTCCGATGGTATTACCCGATGGTCAAATCGGCTATGTCCTCCAACAGCCTGGTGTACAGG GCCCACCTGCTCGACCCCGTAGAAATGATCGAAACGATGGTCGAAATGGTCACGGAAGGCGAGGTGGTGATGGCAATGATGATGGCAATCGTAGTAGAAG GTACCGGCCTTATTAGTCGGATAAGGCTTTTTCGTAGGGAGGGGGTGGGAGGGGATTTTGAGACTAGAGACAGAAAATTTTCTTCTAAATACAGTGACAG AAAATCTCCTATCATTCCCTAAAGGGGAAAAGAAAAATAATATAAAGAGAAGACTAAGTTAGGATTAGGAGCAAGTGATACTTTTATTAATTATGAATGT TGGTGTCTATTTTTGGTCTAAGATGTGTTTACATTTTAGTAGAAAATGATGCTGATTTGGTTTCTTTTAATGCCCTGACAAAATAAAATAATGATGTTTC ACTCCTCCCGAAGAGTAACTAGGGACCAGTTCATCACGATTTTATGTTCCAATTGAACACTTTGGAATTGGTAGAATAAATAACCCA
• Tissue: pods
• Gene name: LI_gene_169124;
• Additional information: details;

Expression of Ll_transcript_354060

FPKM

• PAB: 7.7
• PNAB: 12.9
• PS1: 17.1
• PS2: 9.7
• PS3: 13
• PW1: 9.2
• PW2: 8.4
• PW3: 7.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_354060

• Blastp: Heterogeneous nuclear ribonucleoprotein Q from Arabidopsis with 66.42% of identity
• Blastx: Heterogeneous nuclear ribonucleoprotein Q from Arabidopsis with 67.95% of identity
• Eggnog: RNA binding motif protein(ENOG410XTJ5)
• Kegg: Link to kegg annotations (AT4G00830)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419245.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;